Enterobacter bugandensis: FAI37_12320
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Entry
FAI37_12320 CDS
T05993
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ebg
Enterobacter bugandensis
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebg03009
]
FAI37_12320 (srmB)
Enzymes [BR:
ebg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAI37_12320 (srmB)
Ribosome biogenesis [BR:
ebg03009
]
Prokaryotic type
rRNA helicases
FAI37_12320 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_22
Shikimate_DH
AAA_11
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCE28159
LinkDB
All DBs
Position
complement(2539487..2540815)
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AA seq
442 aa
AA seq
DB search
MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLTQEDATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSAAAQETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgctcttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcacctgctcgactttccacgtaaaaaatctggcccgccgcgtattttg
atcctgacgcctacgcgcgagctggccatgcaggttgccgatcacgcgcgtgaactcgcg
gcgaatacgcatctggatatcgccaccatcaccggcggcgttgcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgtcgcgacgacgggccgcctgctgcagtat
attaaagaagagaacttcgactgccgcgcggtagaaacgctgatcctcgacgaagcggac
cgcatgctggacatgggctttgcgcaggatatcgagcatattgcaggtgaaacgcgctgg
cgtaaccagacgatgctgttctctgccacccttgaaggggatgcgattaaagacttcgca
gagcgtctgctggaagatccggtggaagtctctgcgacgccatccacgcgagagcgtaaa
aagatccaccagtggtattaccgtgcggacaaccttgagcataaggttgagctgctcaag
cacctgctgacgcaggaagacgccacccgcactatcgtgtttgtgcgtaagcgcgagcgc
gtgcacgagctggctgaaatgctgcgcaacgccgggatcaacaactgctatcttgaaggt
gagatggctcagatcaagcgaaccgaaggcattaagcgcctgaccgatggccgcgttaac
gtgctggtcgcaacagacgttgccgcccgcgggatcgacatccctgacgtgagccacgtc
attaacttcgatatgccgcgcagcggagatacttacctgcaccgcattggccgtaccggt
cgcgcgggccgcaaagggattgcaatttcactggttgaagcgcatgactacctgctgctg
cagaaaattggccgctatgttgacgagccgctgaaagcgcgcgttattgatggcttgcgc
ccaaccacacgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaagccgcgcgtgaagcagcgccaccgc
gataccaaaaacattggtaagcgtcgtaagccaagcgctgccgcgcaggaaacgaagact
gaagagtaa
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