Enterobacter bugandensis: FAI37_16690
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Entry
FAI37_16690 CDS
T05993
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ebg
Enterobacter bugandensis
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebg03032
]
FAI37_16690 (topA)
03400 DNA repair and recombination proteins [BR:
ebg03400
]
FAI37_16690 (topA)
Enzymes [BR:
ebg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FAI37_16690 (topA)
DNA replication proteins [BR:
ebg03032
]
Prokaryotic type
DNA Topoisomerases
FAI37_16690 (topA)
DNA repair and recombination proteins [BR:
ebg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FAI37_16690 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCE28951
LinkDB
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Position
3475121..3477718
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH
HNDKPFRPENRDQTMAAVALLEKARYQVLEREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQFASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELLLVDLVPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDEVASHKAEWKKVLDSFFSDFTNQLEKAEKDPEEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgttggtcacatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccatggcacaactgggat
gcacaatatgaagtgctgcccgggaaagaaaaagtcgttaacgagctgaagcagctggct
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgct
tggcacctgcgggaagtgatcggaggggatgacaaacgctacagccgcgtagtgtttaac
gaaattacaaagaatgcgattcgtcaggcgtttgagaagccgggcgagctgaatatcgac
cgtgtgaacgcccagcaggcgcgtcgctttatggaccgcgttgtgggctacatggtttct
cccctgctgtggaaaaagattgcccgcggcctgtctgcaggacgcgtgcagtctgtagcc
gtgcgtcttgtcgttgagcgtgaacgcgaaattaaagccttcgtgccggaagagttctgg
gaagttgacgccaatgtcaccaccccgggcggtgatgcgctgccgctgcaggtaagccat
cacaacgataagcctttccgtcctgaaaaccgcgatcagaccatggccgccgtggcgctg
ctggaaaaagcgcgctaccaggtactggaacgcgaagataagccgaccagcagcaagcct
ggtgcgccgtttatcacgtccacactgcaacaggcggcgagcacccgtctgggttacggc
gtgaagaaaaccatgatgatggcccagcgcttgtatgaagcgggttacatcacctacatg
cgtactgactccaccaacctgagccaggacgcggtgaacatggtgcgcggctacatcagc
gacaacttcggtaaaaaatacctgccggaaagccccaaccagttcgccagcaaagagaat
tctcaggaagcgcacgaagcaattcgtccctctgatgtctctgttttagccgagtcgctg
aaggatatggaagccgacgcccagaagctgtatcagctgatctggcgtcagtttgtcgcg
tgtcagatgacgccagcgaaatatgattccactacgctgaccgtcggtgcgggcgatttc
cgtttgaaagcgcgcggtcgtatcctgcgcttcgacggctggacgaaagtgatgcctgca
ctgcgtaaaggtgatgaagaccgtacgctgcctgcggtaaacaaaggcgacgagttgttg
cttgtcgacctggttccggcccagcacttcaccaagccgcctgcgcgctttagtgaagcg
tcgttggttaaagagctggaaaaacgcgggattggccgtccgtcaacctacgcgtcaatc
atctcgaccattcaggaccgcggttacgttcgcgtagagaaccgccgtttctatgccgaa
aaaatgggtgagattgtcactgaccgtctggaagctaacttccgcgaattgatgaactac
gacttcaccgcgcagatggaagacagcctcgacgaagtggccagtcacaaggcggagtgg
aagaaggttctcgatagcttcttcagcgactttaccaaccagcttgagaaagcggagaaa
gatcctgaagagggcggcatgctgcctaaccagatggttctgaccagcatcgactgcccg
acctgcggccgcaagatggggatccgtactgcgacaacgggcgtgttccttggctgttca
ggctatgcgctgccaccaaaagagcgctgcaaaacaaccatcaacctggtgccggagaac
gaagttctcaacgtgctggaaggtgatgatgcggaaaccaacgccctgcgcgcgaaacgc
cgctgcaaaaaatgcggcacggcgatggacagctatctgatcgatcctaaacgtaagctg
cacgtgtgtggtaacaacccaacgtgcgacgggtatgagatcgaagagggtgagttccgc
attaaaggctatgacggcccgattgtggagtgcgagaagtgtggctctgagatgcacctg
aaaatgggacgtttcggtaagtacatggcctgcaccaacgacgagtgtaagaacacgcgc
aaaattctgcgcaatggtgaggttgctccgccgaaggaagatccggttccgctgccagaa
ttgccgtgtgaaaaatccgacgcgtacttcgtgctgcgtgatggtgccgcaggtgtcttc
ctggccgccaacaccttcccgaaatcgcgtgaaacgcgcgccccgctggtggaagagctg
catcgcttccgcgatcgtctgcctgagaagctgcgttatctggccgatgcgccacagcag
gatcctgaaggcaataagacggtggtccgttttagccgtaaaacgaagcagcagtacgtt
gcggcagagaaagagggtaaagcgaccggatggtccgccttctttgtcgatggcaaatgg
gttgaaggcaagaaataa
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