Enterobacter bugandensis: FAI37_18670
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Entry
FAI37_18670 CDS
T05993
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ebg
Enterobacter bugandensis
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebg03019
]
FAI37_18670 (hrpA)
Enzymes [BR:
ebg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FAI37_18670 (hrpA)
Messenger RNA biogenesis [BR:
ebg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FAI37_18670 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
ResIII
NACHT
AAA_16
NTPase_1
PhoH
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QCE29323
LinkDB
All DBs
Position
complement(3899274..3903176)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKFTFPMLLQQLDSLTLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPAITYPENLPVSQKKQDILQAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ASIYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDEALFEFYDQRISHDVISARHFDSWWKKASKATPDLLNFEKSMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGTDADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDREDW
NWDQVPDHLKISFRVVDDKNKKLQEGRSLSELKEALKGKVQETLSAVADDGIEQSGLHIW
SFGQLSESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEGFAKLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPARRDDED
VQEIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaattcaccttcccgatgctcctgcaacagctcgattctctgacg
ctgcgcgataaacagcgcttcgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggagatggccaaagagattgaacaggcggcagggaag
gttgtgctgcgcgaagccgcgcgtccggcgatcacctacccggaaaacctgcccgtcagc
cagaagaaacaggacatccttcaggccgtccgcgatcaccaggtggtgattgtcgcgggg
gaaaccggttcaggcaaaactacccagctgccgaaaatctgcatggagctgggccgcggg
gtgaaggggctgattggccacacccagccgcgtcgtctggcggcgcgcaccgtggcgaac
cgtattgccgaagagctgcagacggagccgggcggctgcatcggctacaaggtacgattc
agcgaccacgtcagcgacaacaccatggtcaagctgatgacggacggtatcctgctggcg
gaaatacagcaggaccgcctgctgatgcagtacgacaccatcatcattgacgaagcgcac
gagcgcagcctgaacattgacttcctgcttggctatcttaaagagctgctgccacgtcgc
cctgatctgaaaatcatcatcacctccgcgaccatcgacccggagcgcttctcaaaacac
ttcaacaatgcgcccattattgaagtgtcgggccgcacctatcccgtggaagtgcgctat
cgcccgattgtggaagaggcggacgataccgagcgcgatcagctgcaggccatcttcgac
gccgttgacgagctgggcaacgagagcgcgggtgacatcctgatcttcatgagcggcgag
cgcgaaattcgcgataccgccgatgcgctcagcaagcgcgacctgcgccataccgagatc
ctgccactgtacgcgcgcctgtcgaacagcgagcaaaaccgcgtcttccagccacacagc
ggacgccgcatcgtgctggcgaccaacgtggcggagacctcgctgaccgtaccggggatt
aaatacgttatcgacccgggcacggcgcgcatcagccgctacagctaccgcactaaagtc
cagcggctgccgattgagccggtctcccaggcgtctgctaaccagcgtaagggccgctgc
ggccgcgtgtctgaagggatctgtattcgtctctattccgaagacgatttcctgtcgcgc
ccggagtttaccgacccggaaattctgcgcaccaacctggcgtccgttatcctgcagatg
accgcgctggggctgggcgacatcgcggcattcccgtttgtggaagcgccggacaagcgc
aacattcaggatggcgtgcgtctgctggaagagctcggggcgattaccaccgacgagcag
gcgagcatctataagctgacgccgctgggccgccagctcagccagctgccggtcgacccg
cgcctggcgcgcatggtgctggaagcgcaaaagcacggttgcgtgcgcgaggcgatgatc
atcacctcggcgctctccattcaggacccgcgcgagcgtccgatggacaaacagcaggcg
tcggacgaaaagcaccgccgcttccacgacaaagagtccgatttcctcgcctttgtgaac
ctgtggaactacctcggcgagcagcagaaagcgctctcctcgaaccagttccgccgccag
tgccgcgtggatttccttaactacctgcgcgtgcgtgaatggcaggatatctacacccag
ttgcgccaggtggtgaaagagctgggcattccggtgaacagtgaaccggcggagtaccgc
gaaattcacatcgcgctgctgaccggcctgctgtcccatatcgggatgaaagatgcagat
aagcaggaatataccggcgcgcgtaacgcgcgtttctccatctttccgggttccggcttg
ttcaagaagccgccgaagtggaccatggtcgccgagcttgtggaaaccagccgcctgtgg
gggcgcattgccgcgcgcatcgacccggaatgggttgagccggtggctcagcacctgctg
aaacgctcgtacagcgagccgcactgggagcgcgcgcagggcgcggtgatggcgaccgaa
aaagtgaccgtttacggcctgccggtggtcgccgcgcgtaaggtcaactacagccagatc
gatccggcgctcagccgcgagctgtttatccgccacgcgctggtggagggggactggcag
acgcgccacgcgttcttccgtgaaaacctgaagctgcgcgccgaggtggaagagcttgag
cacaagtcccgacgccgcgacattctggtggacgatgaggcgctgtttgagttttacgac
cagcgcatcagccatgatgttatctccgcccgccactttgacagctggtggaagaaggcc
agcaaagcgacgccggacctgctcaacttcgaaaagagcatgctgattaaagagggggcg
gagtcggtcagcaagctcgactacccgaacttctggcatcagggcaacctcaagctgcgt
ctgacctaccagtttgaaccgggcaccgacgcggacggcgtaaccgtccacattccgctg
ccgctgttaaaccaggtcgacgagagcgggtttgagtggcaaattcccggcctgcgccgc
gagctggtgattgcgttgatcaaatccctgccgaaaccggtgcggcgcaattttgtgcca
gcgccaaattatgcggaagcgtttctgggccgcgtcacgccgctggaactgccgctgctg
gacgcgctggagcgtgagttccgccgcatgaccggtaccaccatcgaccgcgaagactgg
aactgggatcaggtgcccgatcacctgaaaatcagcttccgcgtcgtggatgataaaaac
aaaaagctgcaggaagggcgttctctcagcgagctgaaagaggcgctgaaaggcaaagtt
caggagacgctttctgcggtggcggacgacggcatcgagcagagcgggctgcatatctgg
agctttggccagctttcggaaagctacgagcagaagcgcggcaactataaggtcaaagcc
tggccggcgctggtggacgaacgtgacagcgtggcgatcaaactgtttgataacccgcag
gaacagcagcagatgatgtggcgcgggctgcgccgcctgctgctgctcaacatcccgtca
ccgatcaagtatctgcacgagaagctgccgaataaagccaagctggggctctactttaac
ccgtacggcaaggtgctggatctgattgacgactgcatctcctgcggcgtggacaagctg
atccacgaggcgggcggcccggtctggacggaagaaggttttgcgaagctgcatgacaag
gttcgcgccgagctgaacgacaccgtggtggagattgccaaacaggtcgagcagatcctc
accgccgtgttcaatatcaacaagcgcctgaaggggcgcgtggatatgaccatggcgctg
gggctgtcggacgtgaaggcgcagatggcggggctggtgtaccgcggctttgtcaccggc
aatggctttaagcgtctgggcgatacgctgcgctatctgcaggcgattgaaaaacgtctg
gagaaaatggcgatcgatccgcaccgcgatcgcgcgcagatgctgaaggtcgaaagcgtg
cagcaggcgtggcagcagtggttaaacaagctgccgccggcgcgccgcgacgatgaagat
gtgcaggagatccgctggatgatcgaggagctgcgtgtcagcttctttgcccagcagctc
ggtacgccgtatccgatttcggataaacgtatattgcaggcgatggagcagatttccgct
taa
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integrated database retrieval system
