Endosymbiont of Bathymodiolus septemdierum: BSEPE_0111
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Entry
BSEPE_0111 CDS
T04606
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03030
DNA replication
ebh03410
Base excision repair
ebh03420
Nucleotide excision repair
ebh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSEPE_0111 (polA)
03410 Base excision repair
BSEPE_0111 (polA)
03420 Nucleotide excision repair
BSEPE_0111 (polA)
03440 Homologous recombination
BSEPE_0111 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebh03032
]
BSEPE_0111 (polA)
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0111 (polA)
Enzymes [BR:
ebh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSEPE_0111 (polA)
DNA replication proteins [BR:
ebh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSEPE_0111 (polA)
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSEPE_0111 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSEPE_0111 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
PylC-like_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAS67135
UniProt:
A0A0N7KB63
LinkDB
All DBs
Position
119553..122285
Genome browser
AA seq
910 aa
AA seq
DB search
MPHKLILLDGSAFLFRAYFSTISQNLTNDAGFPTGAMFGVINAIKQLQRKYPEAKMIAIF
DAKGKNHRHELYSDYKAHRKPAEDDLVVQIEPLYEIIRAMGLHFMCVPSVEADDVIATLA
KIADKRQIKTIIASGDKDLMQLVSDNITQLDMKGQLYDRQAVIEKMGVAPECILDLLALT
GDSADNIPGVPSVGPKTAVKWLEKFETIEGVKDNAEQIGGKVGEKLRDSFDKLDLSYQLV
KLKSDVELPCNILDDEPGVDNVKLANLYQQYGFAMWLKQLDGTTPTPVQTPQPTEPAAEV
ERPSTEWLNDYTQTTIFAQSDFDNLIKRLESCKTFVFDLETTSLDYMNAKIVGWVFLVDK
DSFYIPVAHDYLDAPQQLNFNAVLNILKPILESNTIGKIGQNLKYDSHILANYQVTLQHI
ADDTMIKSYCLNSVATRHNMDDLSEHYLGHKTIHFADVAGKGKKQLSFNQVNLEVAAPYA
CEDVIVTHRLNEVLANALVKFPDLYKLYLKIELPLIPILVRMERNGVALDVQALATQQVD
IVKQMADITTQVFALADKEFNLESPKQVGEVLFSEEGLGLEAKKKTPKGVPSTNEEALRL
LDHPVVDLILSYRALTKLNSTYLEALPKQVDLHTKRLHTSYHQALTATGRLSSSNPNLQN
IPIRSEQGARIRGAFIAREGCKILAADYSQIELRIMAHISQDTHLLDAFNNDMDVHSATA
SMMFGIPIDEVTKDHRRKAKAINFGLIYGMSAFGLAKQIDISRTEAKQYIDAYFANYPGV
AQYMENIKETAKSQGFVETVLGRRLYLPQINHKNKMLQQHALRTAINAPMQGSSADIIKK
AMIDVNNWIGKDNPDIKMIMQVHDELVFEVKDSRIDEFAQKIQSLMENAHGLDIPLKVDA
GIGDSWQQAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgccacataaacttatattacttgacggttcagcctttttatttagggcttatttttcc
acgatttcacaaaatcttaccaatgatgcgggttttccaacgggtgcaatgtttggcgtt
atcaacgctatcaaacaattgcaacggaaatacccagaggcaaaaatgattgccattttt
gacgccaaaggcaaaaaccatcgccacgaactttattcagattataaagcccatcgcaag
cctgctgaagacgatttagtggtgcaaatcgagcctttatatgaaatcattcgcgctatg
ggtcttcattttatgtgtgtgcccagcgtagaggcggatgatgtgattgcgactttggca
aagattgctgataaacgccaaatcaaaactatcattgccagtggcgataaagatttgatg
cagttggtcagtgacaacattactcaattggatatgaaggggcaattatacgaccgccaa
gccgtgattgaaaaaatgggtgttgctcctgaatgcattttagacctattagcgctcacg
ggtgatagtgcagataacattcctggggtaccgagtgttgggccaaaaacagcagtcaaa
tggttagagaaatttgaaactattgagggtgtgaaagacaatgccgaacaaataggtgga
aaagttggcgaaaaactgcgtgacagttttgataaattagacctgtcttaccaattggtt
aagctcaagtctgatgttgaattaccatgcaatatcttagacgatgagcctggcgttgac
aatgtaaaacttgccaatctataccagcaatatggttttgcaatgtggttgaagcagtta
gatggcacaacccccacacctgttcagacgccacaaccaaccgaacctgctgccgaagta
gaacgcccctctactgagtggctaaacgactacactcaaaccactatattcgcacaatcc
gattttgataatttgatcaaacgcctagaatcgtgcaagacttttgtctttgatttagaa
accacctcattagattatatgaacgccaaaatcgttggttgggtattcttagttgataaa
gacagtttctacatccctgttgcccatgattatttggatgcgccacaacaattgaatttt
aacgctgtattaaatattttaaagccgattttagaaagcaataccatcggcaaaattgga
caaaatcttaaatacgacagtcacattttggccaattatcaagtaactttgcaacatatt
gccgacgacactatgataaagtcttactgtctaaattcagttgccactcgtcataatatg
gacgatttatctgagcattatttggggcataaaaccattcattttgccgatgttgctggc
aaaggtaaaaagcaactgtcgtttaatcaagttaatttggaagtcgccgccccatacgcc
tgtgaagatgtcattgtcacccacagacttaatgaagtgttggctaatgcgttggttaaa
ttccctgatttatacaaactttatctaaaaatagaactgcctctcattcccatcttggtg
cgaatggagcgcaacggcgtggcattagatgtacaagcccttgccacccaacaagtggat
atcgtcaaacaaatggcagatattaccacgcaagtgtttgcattagcggataaagaattc
aacttagagtcgccaaaacaagtcggtgaggtgttattctcagaagagggcttgggttta
gaagccaaaaagaaaaccccaaaaggtgtgccttccactaacgaagaggcattgaggtta
ttagaccatcctgttgttgatttaatcctcagttaccgcgccctgaccaaactcaattct
acctatcttgaggccttaccaaaacaagttgatttgcacaccaaacgcctacatacttct
tatcatcaggctttaactgccacaggtcgcttatcttcctctaatccaaacttgcaaaat
attccgattcgctctgagcaaggtgctcgtatccgtggtgcttttatcgcccgcgagggc
tgtaaaatcctcgctgccgattactcacaaatcgaactacgaattatggcacatatctct
caagacacccatttattagatgctttcaacaacgatatggatgtccatagtgccactgca
tcaatgatgttcggcatccccattgacgaagttaccaaggaccaccgtcgcaaagccaaa
gccattaatttcggactcatctatggcatgagtgcgtttggtcttgccaaacaaattgac
atttctcgcacagaggctaagcaatacattgacgcttattttgctaattatcctggcgtc
gcccaatatatggaaaacataaaagaaaccgccaaatcccaaggcttcgtagaaaccgtc
ctaggtcgtcgcctctatctcccccaaattaatcacaaaaacaaaatgctgcaacagcac
gccttacgcaccgccattaatgccccgatgcaaggctcttctgccgacatcattaaaaaa
gccatgattgatgtcaacaactggattggcaaagataatcctgatattaaaatgattatg
caggtgcatgatgaattggtgtttgaagttaaagattcaaggatagatgagtttgctcag
aaaatacaaagtctgatggaaaatgcacacggactagatattccgctaaaagtggacgcg
ggtattggtgattcttggcagcaggcacactaa
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