Endosymbiont of Bathymodiolus septemdierum: BSEPE_0120
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Entry
BSEPE_0120 CDS
T04606
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0120
Enzymes [BR:
ebh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSEPE_0120
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSEPE_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_11
AAA_30
AAA_22
DEAD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
BAS67144
UniProt:
A0A0P0UQW0
LinkDB
All DBs
Position
130423..133533
Genome browser
AA seq
1036 aa
AA seq
DB search
MNDQKQRNQALDISQSFIVQAPAGSGKTELLTQRYLKLLAHCVEPESVIAMTFTNKAVDE
MTHRVLSALKSTVQSRPSEPHKQTTYDLAAAAMRHSDEQGWQLLQNPKRLKISTIDGLYS
LITNRYPLPGQLVPRQIMAQQWERNKAYQIAAQQTLMLIDDEEYGKDIQNLLLHLDNNVS
KFESLVVQMLSKRDQWLGRLYRDNVLDLQILQDSARTIVKQYFEYLQPLAKVYLDDEFFG
LLSAREGKLYTLPTTNFSDLEAWQTIADLCLTKKGTWRTAVNKLKENLSEQKALGEALQG
LRSLPNIDFSQAQADILQTIAQVLKLSVAQLNIYFEAQQAHDFIEVALNANQALDSQIGV
SDIALFMDYKVQHLLIDEFQDTSASQFNTVEKLIEQWQTDDEKTLFLVGDPMQSIYRFRE
SQVGLFLQVRDKGIANIRPTSLVLSTNFRSSKSIVEGNNGFFSKIFPECDDVHKGAISYS
PSLANSDTKDDNAIAFYPFAHDQYLCEAKTIGTIVAASLAKNTQNTIAILVRGRAHLLHI
AQQLMDEKIAFESVDITELKDHLLTRDLLSLSKALLHLGDKLAWLSVLRAPWCGLILDDL
LVLSEDDNQIIYRQLNDEAILVKMSADGRERAQHLYQCLQEVISNQGRFNFVELLTHTMN
QLGLKNETLAKTELAIKDKFLQIIYECEQQQLLSADTIEQMIEKLYAPSEKAQVKLMTVH
ASKGLEFDTVIIPGLGRSSGRDDSLIIRLREFSNKDLLLAPMKSASATQESGVYRYLKSI
ETEQNYYESMRLLYVAMTRAKSHLHLLGAVNKSGNIGKNTLLELLGQFFTHRFDDIDKTP
DTVESAEILQLARVSELKTPVNRMQEKGEMVEYQQNFERLFKRALGTLVHQYYEHQLFEP
SAENIRNQLISIGTPPSEIEKWQAVITKLLNNTKNDAQFEWLFKDRASARNEAEFSINGS
TIAIDRLFIDEGTLWVIDFKTAKPAEDEPLEAFIKRQQQEHTKQLQFYKTAMSEIYDYPV
RCALYCPSVKQLIDIS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaccaaaaacaaagaaatcaagccttagatattagccagtcttttatcgtgcaa
gcgccagcaggatcgggaaaaacagagttattaacgcaacgctatttgaaattattggca
cattgtgtagaacctgagagtgtcattgcgatgacttttaccaataaagcggtggatgag
atgacgcatcgggtgttatcggcgttgaaatcgacagtgcaatcacgacctagtgagcca
cataaacaaacgacttatgatttggcagcagcggcaatgaggcactcggatgagcaaggg
tggcagttgttgcaaaatccgaaacgcttaaaaatctcaaccattgatgggctttatagt
ctgattactaatcgttatcctttgccaggtcagttggttccgagacaaattatggcgcag
caatgggagcgaaataaagcctatcagatagcagcacagcagacattaatgttgattgat
gatgaggagtatggcaaggatattcaaaatttgttgttacacctggataataatgtcagc
aagtttgagagcttggtggtgcagatgctgtcgaagcgggatcaatggttggggcgcttg
tatcgggataatgtgctagatttacaaatattgcaagacagtgctagaacgattgtgaaa
caatattttgagtatttacaaccattggctaaagtgtatttagatgatgaattttttgga
ttgttgtctgctcgtgaaggtaagttatacaccctgccaacgactaatttttcggatttg
gaggcgtggcagaccattgcagatttatgtttgaccaaaaaaggcacatggcgtacagca
gttaataaactcaaggaaaacttgtccgaacaaaaagcacttggcgaagcattgcaaggc
ttaaggagtttgccaaatattgatttttcgcaagcacaggcggatattttgcagaccatt
gcacaggtattaaaattatctgtggcacaactcaatatctattttgaagcgcagcaagca
cacgattttattgaggtggcgttgaatgctaatcaggcattggacagtcaaattggcgtg
agcgatattgccctatttatggattataaagtgcaacatttgctgattgacgagtttcaa
gacacttcggcatcacagtttaatacggttgaaaaattgatagaacaatggcaaacagat
gatgaaaaaacgctgttcttggtgggcgatccaatgcaatcaatttaccgatttagagaa
tctcaggtggggttatttttgcaagtgcgagataagggaattgcgaacattcgtccaact
tcattggtattgagtaccaattttcgctcttcaaaaagtattgttgagggcaataatgga
tttttcagtaagattttccctgagtgtgacgatgtacataaaggtgcaatttcttactca
ccatcgcttgcaaattcggatacaaaggatgacaatgccattgcattctatccctttgcc
cacgaccaatatctatgtgaagcaaaaacgattggcacgattgtcgccgctagtttggcg
aaaaatacacaaaatacaattgcgattttggtgcgtgggcgggcacatttgttgcacatc
gcacaacagttaatggatgagaaaattgcatttgaatcggtagatattaccgaattaaaa
gaccatttattgacgcgggacctgctctcgctaagtaaggctttattgcatttgggcgat
aaactggcgtggttgagtgtgttgcgcgccccttggtgcggcttgattttggatgatttg
ttggtgctatctgaggatgataatcagataatttataggcaactaaatgatgaggcgata
ttggtaaaaatgagtgcagatgggcgtgagcgtgcacagcatctatatcagtgtttgcaa
gaggttattagcaatcaagggcgatttaattttgtggaattattgacccatacaatgaat
caattggggttaaaaaatgagactttagcaaaaacggaattggcaattaaagacaaattt
ttgcagattatttatgaatgcgaacagcaacaattactgagcgcggataccattgaacag
atgatagaaaagttatatgcaccgagtgaaaaggcgcaggtgaagttaatgacagtgcat
gcatcaaagggcctggagtttgacacggtgattattccgggcttgggtcggagttctggg
agggatgattcgctgattattcgattgcgtgaattttcgaataaggatttactattagca
ccaatgaagtcggcatctgccacacaagaaagtggggtatatcggtatttgaaatctatt
gaaacagagcaaaactattatgaaagcatgcgcttattgtatgtggcaatgacgcgagca
aaaagccatttacacctattgggggcagtaaataagtcagggaatatcggtaaaaatacg
ctgttggaattattggggcagttttttacacatcggtttgatgatattgacaagacgcct
gatacagtggaatcagcggaaattttgcagttagcgcgtgtttccgagttaaaaacgcca
gttaatcgaatgcaagaaaaaggcgaaatggtagaatatcagcagaattttgaacgctta
tttaagcgtgcattaggcactttggtgcatcaatattatgagcatcaattgtttgagccg
agcgcagagaatattcgtaatcaattgattagtataggcacgccgccgagtgagattgaa
aaatggcaggcggttatcactaaattattgaataacaccaaaaatgatgctcaattcgag
tggctgtttaaagaccgagcatccgcacgaaatgaagcggaatttagcattaatggtagc
accatcgctattgacagactatttattgatgaggggactttatgggtgattgattttaaa
acagccaaacctgctgaggatgagccattagaagcctttattaaacgacaacagcaagaa
cacacaaaacaattgcagttctataaaaccgcaatgtctgagatttacgactatcctgtg
cgttgcgcactatattgccctagcgtcaaacaattaatcgacatttcctaa
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