Endosymbiont of Bathymodiolus septemdierum: BSEPE_0168
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Entry
BSEPE_0168 CDS
T04606
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh00010
Glycolysis / Gluconeogenesis
ebh00020
Citrate cycle (TCA cycle)
ebh00260
Glycine, serine and threonine metabolism
ebh00280
Valine, leucine and isoleucine degradation
ebh00310
Lysine degradation
ebh00620
Pyruvate metabolism
ebh00630
Glyoxylate and dicarboxylate metabolism
ebh00640
Propanoate metabolism
ebh00670
One carbon pool by folate
ebh00785
Lipoic acid metabolism
ebh01100
Metabolic pathways
ebh01110
Biosynthesis of secondary metabolites
ebh01120
Microbial metabolism in diverse environments
ebh01200
Carbon metabolism
ebh01210
2-Oxocarboxylic acid metabolism
ebh01240
Biosynthesis of cofactors
Module
ebh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ebh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BSEPE_0168 (pdhD)
00020 Citrate cycle (TCA cycle)
BSEPE_0168 (pdhD)
00620 Pyruvate metabolism
BSEPE_0168 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
BSEPE_0168 (pdhD)
00640 Propanoate metabolism
BSEPE_0168 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSEPE_0168 (pdhD)
00280 Valine, leucine and isoleucine degradation
BSEPE_0168 (pdhD)
00310 Lysine degradation
BSEPE_0168 (pdhD)
00380 Tryptophan metabolism
BSEPE_0168 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BSEPE_0168 (pdhD)
00670 One carbon pool by folate
BSEPE_0168 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ebh04147
]
BSEPE_0168 (pdhD)
Enzymes [BR:
ebh01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BSEPE_0168 (pdhD)
Exosome [BR:
ebh04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BSEPE_0168 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_8
GIDA
HI0933_like
AlaDh_PNT_C
FAD_binding_3
Thi4
DAO
3HCDH_N
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BAS67192
UniProt:
A0A0P0UPU6
LinkDB
All DBs
Position
complement(176686..178089)
Genome browser
AA seq
467 aa
AA seq
DB search
MIKTQVVVIGSGPGGYTAAFRAADLGKQVVLIERYESLGGVCLNVGCIPSKALLHTAEII
NEAAEAKHLGVTFGSPEISIDGVRKNKDAVVAKLTDGIKALANARKVKVVKGYGKFISNT
QIAIEGSDEIVEFEQCIIAAGSRVSKIPAFPFDDPRVMDSTDALELDSVPKRLLVVGGGI
IGLEMATVYAALGSEITVVELSDQLIAAADKDIVAPLFKRIKKQYENIFLNTKVTSMDAQ
NDGIKVGFEGKNAPETDTFDKVLVSIGRSANGKLIDANKAGVNVDDWGFIKVDKQMKTNV
ENIYAIGDIVGQPMLAHKAVHEAKVAAEVICGHKSGFDALTIPSVAYTDPEVAWTGKTEK
ELKAEGIDYEVGKFPWAASGRSLSIGRSEGISKALFDKHTHRILGMGICGTNAGELIAEP
TLAIEMGCDMSDIALTIHAHPTLSETTAFAVEMAEGTITDLLPPKKR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaacgcaagttgttgttattggttcaggcccaggaggctacacggctgcattt
cgcgcggcagatttaggcaaacaagtggtgctaattgaacgctatgaaagtttgggtggc
gtgtgcttaaatgtcggctgcatcccttcaaaagctttacttcacaccgcagaaatcatt
aacgaagccgcagaagcaaaacatcttggtgtgacattcggcagtccagaaatcagcatt
gacggcgtacgaaagaacaaagatgccgtggttgctaaattaacagatggcattaaagcc
ttggcaaatgcaagaaaagtgaaagtagtcaaaggctacgggaaattcatttccaacacc
caaattgctattgagggcagtgacgaaatcgttgaatttgaacagtgtatcattgccgca
ggctctcgcgttagtaaaatccctgcttttccattcgacgacccacgcgtaatggactca
accgatgctttagaattagacagtgtgccaaaacgcttattggtcgttggtggtggtatc
atcggactggaaatggcaacggtttacgcggcattaggcagtgaaatcacggtggtagaa
ttgtcagaccaactgattgcagcggccgataaagacattgttgccccactatttaaacgc
attaaaaagcaatacgaaaatatctttctaaacaccaaagttaccagtatggacgcacaa
aatgacggcataaaagtcggctttgaaggcaaaaatgcaccagaaacagatacttttgac
aaagtcttggtatccattggtcgcagtgcaaatggcaaactaattgacgccaataaagca
ggtgttaatgttgacgactggggctttatcaaagtcgataaacaaatgaaaaccaatgta
gaaaatatctacgccatcggcgacatcgtcggccaacctatgctcgcccacaaagccgtt
cacgaggccaaagtggctgctgaagttatctgtggacacaaatcaggctttgatgcattg
accatcccctcagtcgcctacaccgacccagaagtcgcctggacaggtaaaactgaaaaa
gaattaaaagcagaaggtattgattatgaagtcggaaaatttccatgggcagcctcagga
agaagtttaagtatcggcagaagtgaaggtatctccaaagccctattcgacaaacacaca
caccgtattttaggcatgggcatctgcggtactaacgcaggtgagctcatcgccgaaccc
acccttgccattgagatgggctgcgatatgagtgacattgcactcaccatccacgcccac
ccaaccctcagcgaaactactgctttcgccgttgaaatggcagaaggcacgattaccgac
ttactgccaccgaagaaaagataa
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