Endosymbiont of Bathymodiolus septemdierum: BSEPE_0575
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Entry
BSEPE_0575 CDS
T04606
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh00550
Peptidoglycan biosynthesis
ebh01100
Metabolic pathways
ebh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BSEPE_0575 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSEPE_0575 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ebh01011
]
BSEPE_0575 (mrdA)
Enzymes [BR:
ebh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BSEPE_0575 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ebh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BSEPE_0575 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
dCache_1
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAS67582
UniProt:
A0A0P0URB3
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All DBs
Position
complement(555733..557577)
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AA seq
614 aa
AA seq
DB search
MDKISNTPLENKIFSNRIILSIVFILVLTGVLISRLFNLQIINYSYYTEESLGNQMRTLS
IAPTRGNIFDRNGKILAGNQLAYQLTLTPEKTKDIPKTLLALKQQKLINDNDIATFNKHR
GRYKKFHNIPLKYKLNEEQVAEFLVSNSFIGIDIEPYFHRVYPNNESSVHVVGYVSRMNK
KDKKLYNKKDYIGTSFVGKTGIEKQYELLLHGKSGKKQIERNVTGRIINTKVIKEAQKGV
DLYLSIDLEMQKKAESLLKGKRGSIVVVDTTNGEVLVMVSTPVYNPNWFVHGISHKDYQK
LQNSKDIPQFNRAIQGLYPPGSTIKPMVALAGLEQGKITAHSESYCPGFFKLPNVKRKFN
DWKRSGHGVVDVKDSIAQSCDVFFYELADKMGINDLHDGLALFNFGKKTGVDIPGERSGI
LPSKSWKKVNKDEPWYRGETLITGIGQGFMTSSPLQLAVATAALANKGVLIQPKVLKSLQ
IPGEAAKESKRGSKQQIPIKDIHNWETVIDGMRQTIYSPRGTGRRLNKALKYTLAGKTGT
AQVFGLDAEEQYIAANLDERLRDHALFTGFAPIENPKIAIAVIVENAGSGSAKAAPLAKK
VLDVYFKKLAKTAL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcagcaatactccactagaaaataaaattttttctaataggataatttta
tccattgtttttatccttgttttaactggcgtcttaatatcaagacttttcaacctgcaa
atcataaattactcatattacactgaggaatcccttggtaatcaaatgcgcacattgtca
atcgcaccaacacggggtaatatttttgatcgcaatggcaaaattcttgctggcaatcaa
cttgcttatcaattgacactaacacctgaaaaaaccaaagatattcctaaaactttgtta
gcactcaaacagcaaaaactaatcaatgacaatgacatcgctacttttaataaacataga
gggcgttacaaaaaattccacaacatccctttgaagtacaaactcaacgaagaacaagta
gcagaatttttggtcagtaattcctttattggtattgatattgaaccttattttcatcgg
gtttatcctaataatgaatccagtgttcatgttgtgggttatgtatctagaatgaacaaa
aaagataaaaaactttacaataagaaagattatattggcacttcttttgtcggaaaaaca
ggcattgaaaaacaatatgaacttttgttacatggaaaaagtgggaaaaaacaaattgaa
cgcaatgttactggtcgaatcattaataccaaagtaattaaagaagcgcaaaaaggtgtg
gacttgtatttaagcattgatttagagatgcagaaaaaagcggagtccttgctcaaaggt
aaacgcggatcaattgtggtcgttgatacgacgaatggcgaagtattagtcatggtgagc
acccccgtctacaatcccaactggtttgtgcatggcatctcgcataaagattatcagaag
ctgcaaaactcaaaagacattccacagtttaatcgcgccattcaaggtttgtatccacca
gggtcaactattaagccaatggttgcacttgcagggcttgagcaagggaaaattactgca
catagcgaatcttactgccctggattctttaaactacccaatgtaaaacggaaatttaac
gactggaagcgtagcgggcatggtgttgttgatgttaaggattctattgcgcaatcttgt
gatgtgttcttttatgaattggccgataaaatggggattaatgacttacacgatggattg
gcgctctttaattttggcaagaaaacaggggttgatatccctggggagcgtagcggcatc
ttgccttcaaaatcctggaaaaaagtcaacaaggatgaaccctggtaccggggtgaaact
ttaattaccggtatcggacaaggatttatgacctctagcccgctacaacttgcagttgct
actgccgcattagccaacaaaggtgtgcttattcaaccgaaagtattaaaaagtcttcaa
attcctggcgaagcagctaaagaaagtaaaagaggatctaaacaacaaatcccaattaaa
gatatccacaattgggaaactgtgattgatggtatgagacaaactatctactcaccaaga
ggtacaggtagaagattaaacaaagcattgaaatataccctggcaggaaaaacgggtacc
gcccaagtgtttggtttagatgcagaggagcaatacattgcagctaatctagatgagcgt
ttgcgagaccatgctttgttcacgggctttgcgccgattgaaaaccctaagattgcaatt
gctgtcattgtagaaaatgcgggcagtggtagcgcaaaagcagcaccacttgctaaaaaa
gtcttggatgtttactttaaaaaattagccaagactgctttgtaa
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