Endosymbiont of Bathymodiolus septemdierum: BSEPE_0676
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Entry
BSEPE_0676 CDS
T04606
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebh03032
]
BSEPE_0676 (ihfB)
03036 Chromosome and associated proteins [BR:
ebh03036
]
BSEPE_0676 (ihfB)
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0676 (ihfB)
DNA replication proteins [BR:
ebh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSEPE_0676 (ihfB)
Chromosome and associated proteins [BR:
ebh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BSEPE_0676 (ihfB)
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BSEPE_0676 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAS67673
UniProt:
A0A0P0URE0
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All DBs
Position
642745..643020
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AA seq
91 aa
AA seq
DB search
MKKTELILNLSEESTLTKAEVKSCVDAIIGALTDAIVSGEGVEVRGFGSFYRKHKKARLG
INPKTGEKTQVSAKYLPFFKPGKSLKEVVNN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaacagagttaattctcaacctgtctgaggaatctacactaactaaagcggaa
gtgaagagttgtgtggatgctattataggggcattaacggacgctattgtttctggggaa
ggtgttgaagtgagaggctttggtagcttttataggaagcacaaaaaagcacgattaggc
atcaatccaaagactggagaaaagactcaggtaagtgcaaaatacttgcctttctttaag
ccgggaaaatcacttaaagaagttgtaaataattaa
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