Endosymbiont of Bathymodiolus septemdierum: BSEPE_0729
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Entry
BSEPE_0729 CDS
T04606
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSEPE_0729 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebh03019
]
BSEPE_0729 (pcnB)
Enzymes [BR:
ebh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BSEPE_0729 (pcnB)
Messenger RNA biogenesis [BR:
ebh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BSEPE_0729 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
BAS67723
UniProt:
A0A0P0URK6
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All DBs
Position
692294..693499
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AA seq
401 aa
AA seq
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MSACNLKNFFKRMFTKGEKPATGEPVRQFIEFDKNLIDKNAIKVVSIIHKAGYEVYLVGG
CVRDLLLDLKPKDFDIATNAKPEQVNKLFKRSRLIGRRFRLVHVLFSARDFLEVATFRSG
KVQTAKNGVIVRDNHYGRIEDDVMRRDFNINALYYDLQKKEVIDYVGGLKDIAAGEIHMI
GNAKKRFAEDPVRMIRAIRFAEKLGSEMSEEIKTAIFKQAHLLGNISSARLYEECIKLFQ
NEYSFAVYEQLEEYGLLKYLFKQTHKNDFIKKACNNTSERIKLGKPVTPAFLFAVFLWQA
QNERFALIKRKQRSFHLAQLQACDEAIVNQIKQVSMPRYLTSKIKDVWMMQSKLEKIQPK
KVQSLLDNRSFRMAYDFLLLRSQSINPELKKAVDFWTKAQE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagcctgtaatttgaaaaacttcttcaaacgcatgttcacaaaaggcgaaaaacct
gccaccggagaacctgtccgtcaatttattgagtttgataaaaatctgatagataaaaat
gccattaaagttgttagtattattcacaaagctggttatgaagtctatctagttggcggc
tgcgttagggacttattgctcgatttgaagccaaaagactttgatattgccaccaatgca
aaacccgagcaagttaataaactatttaagcgttctcgtcttattggtagacgctttcgt
ttggtgcatgtattattcagtgcccgtgattttcttgaagtggcaacctttcgttctggt
aaagtgcaaactgctaagaatggtgtaattgtgcgtgataatcattatggcagaatagag
gacgatgtgatgcgtcgggattttaacattaatgctttatattacgatcttcagaaaaaa
gaagtgattgactatgtcggcggtttaaaagatattgcagctggtgaaattcatatgatt
ggcaatgccaaaaaacgctttgcagaagatccagtgagaatgattcgtgccattcgtttt
gctgaaaaactgggctcagaaatgagcgaagaaattaaaacagccatctttaaacaagcg
catttattgggcaatatttcttcggctcgtttgtatgaagagtgtattaaattgttccaa
aatgaatattcatttgcggtgtatgagcagttagaagaatatggtttacttaaatatttg
tttaagcaaacgcataaaaatgattttattaagaaagcctgtaataatacttctgagcgt
attaaattgggcaagccagtgacacctgctttcttgttcgcggtgtttttatggcaggca
caaaatgaacgctttgctttgattaaaagaaagcaacgctctttccatttagcgcagttg
caagcttgtgatgaagcaatcgtcaatcaaattaaacaagtatcaatgccaagatacctt
acttctaaaatcaaagatgtatggatgatgcaatctaaattagagaaaatacagcctaaa
aaagtacagtctttattggacaatcgtagctttagaatggcgtatgattttttgcttttg
cgttcgcagagtatcaaccctgaattgaaaaaagcagttgatttttggaccaaagcgcaa
gaatga
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