Endosymbiont of Bathymodiolus septemdierum: BSEPE_0745
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Entry
BSEPE_0745 CDS
T04606
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSEPE_0745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebh03019
]
BSEPE_0745
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0745
Enzymes [BR:
ebh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSEPE_0745
Messenger RNA biogenesis [BR:
ebh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSEPE_0745
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSEPE_0745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Pribosyltran
DUF4706
Motif
Other DBs
NCBI-ProteinID:
BAS67739
UniProt:
A0A0P0USB4
LinkDB
All DBs
Position
708666..710774
Genome browser
AA seq
702 aa
AA seq
DB search
MRTIALKYLQTALNNQDANFKDGQWESIECLLDHKRMLVVQRTGWGKSMVYFLATKLIRE
SGLGPTLLISPLLSLMRNQLEAASRIGITARTINSTNANEWDKIQNELVDDSVDVLLISP
ERLANDSFRQNILPVIAEKIGLFVIDEAHCISDWGHDFRPDYRRIVRVLQAIPPNVPVLA
TTATANNRVVNDVMLQLGNDIELIRGSLVRESLKLQNINMPSPAARMAWLAQTIPNLPGS
GIIYTLTQRDAERLTEWLQVNEINVKAYHAGIPNREDGTSIKEELEQQLLNNEIKVLVAT
VALGMGFDKPDLGFVIHFQRPASVVHYYQQVGRAGRAVEEAYGILLCGEEDDHIADFFIR
SAFPPQQHIAAILKALDNADDDLSVPSMQRTINIRKSQIDKTIKYLIVESPSPIAKVDSK
WHVTASADNYEIDQEYVNEITLIRKQEQRQMQEYMEHQGCLMVFLQNALDDPNSQNCGKC
KNCNPDLLLPEQYDDKIANRAALFLRRSYQPIEPRKQWPVKDMFKYHQFEKRNIPTELQA
SEGRALSLWRDAGWGQLVASGKYQSNRFADELVTACVEMIAEWKPTSRPEWVTCIPSLNH
PELVPDFAQRLAIALNLPFIPCIGKVRQNDQQKNMENSLHQAQNLDGVFKINLDHKEHSP
CLLIDDMVDSRWTFTVASALLRQTGCTAVYPLALALNSPRMD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaattgctttaaaatacttacaaactgcacttaacaaccaagatgcaaacttt
aaagatggtcaatgggaaagtattgagtgtcttttagatcataaaagaatgcttgtcgtc
cagcgtactggctgggggaaaagtatggtttattttctagcgacaaagcttattcgagag
tctggcttagggccaaccttattaatttctcctctattatcgttaatgcgaaatcaactt
gaagcagctagtcgaataggcattactgctagaacgataaatagtaccaatgctaatgaa
tgggataaaattcagaatgagctggttgacgatagtgtagatgtactccttatttctcct
gagcgtcttgcaaatgactcatttcgccagaatattctccctgttattgctgaaaaaatt
ggactttttgtaattgacgaagctcactgtatttcagactggggacatgattttagaccc
gattacagacgtattgttcgtgtacttcaggctattcctcctaatgttcctgtattagca
acaacggcaactgccaataatagagttgtaaatgatgttatgttgcaactgggtaatgac
attgaactgatcagaggatctttggtcagagaaagccttaaacttcaaaatataaatatg
cctagcccagcagcaagaatggcttggctggcacaaactattccgaatcttccaggtagc
ggaataatctataccctgactcagcgtgatgcagagcgactcaccgaatggctccaagtt
aatgaaattaatgtaaaagcctaccacgctggaattccaaaccgtgaggatggcacttca
attaaagaggagttagaacaacaactactcaataatgaaataaaagttctagttgctacc
gttgctttgggaatggggtttgataagcctgacttaggatttgtaattcattttcaaaga
cctgcttctgtggttcattattatcaacaagttggtcgcgctggtcgtgccgttgaagaa
gcatacggaattctgctttgtggcgaagaggatgatcatattgcagacttcttcatccgt
agcgccttcccccctcaacaacatatcgctgctattcttaaagcacttgataacgcagat
gatgatttatctgtaccatcaatgcagcgcactataaatattagaaagtcacaaattgac
aaaacaatcaaatacctgattgtagaatctccctctccaattgcaaaagttgattctaaa
tggcatgtgacagcctcggcagataactacgaaatagatcaagaatatgtaaatgaaatc
accctgattcggaaacaagaacagaggcaaatgcaggaatatatggagcatcaggggtgt
ttgatggtattccttcaaaatgcactggatgacccaaattcacaaaactgtggtaaatgt
aaaaactgtaatcctgatctccttctgcctgaacaatatgatgacaaaatagcaaatcga
gcagcactttttcttcgaaggagttatcaaccaatcgaacctcgcaagcaatggcctgta
aaagatatgtttaaatatcatcaatttgaaaaaaggaatatccctacagagctgcaagca
tctgaaggtcgcgccctaagtttgtggcgtgatgctggctggggacagcttgttgcttca
ggaaaatatcaatctaatcgttttgcagatgagcttgtaacagcgtgtgttgaaatgatt
gcagaatggaagcccacctctagacctgaatgggtaacttgcatcccgtcacttaaccat
cctgagttagttcctgattttgcacaacgattggcaatagctcttaacctgccattcatt
ccttgcataggaaaagtaaggcaaaatgatcagcagaaaaatatggaaaatagccttcat
caggcacaaaatttagatggtgtattcaaaattaatcttgatcataaagaacatagccca
tgtttgttaattgatgacatggttgattcacggtggacttttactgttgcatcggctctg
ttgcgccaaacaggttgcactgcagtatatcctttggcactagctcttaattcgccaagg
atggattga
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