Endosymbiont of Bathymodiolus septemdierum: BSEPE_0795
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Entry
BSEPE_0795 CDS
T04606
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BSEPE_0795 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebh03019
]
BSEPE_0795 (rnc)
03009 Ribosome biogenesis [BR:
ebh03009
]
BSEPE_0795 (rnc)
03036 Chromosome and associated proteins [BR:
ebh03036
]
BSEPE_0795 (rnc)
Enzymes [BR:
ebh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BSEPE_0795 (rnc)
Messenger RNA biogenesis [BR:
ebh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSEPE_0795 (rnc)
Ribosome biogenesis [BR:
ebh03009
]
Eukaryotic type
90S particles
RNase
BSEPE_0795 (rnc)
Prokaryotic type
rRNA processing factors
BSEPE_0795 (rnc)
Chromosome and associated proteins [BR:
ebh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BSEPE_0795 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
AcMNPV_AC11
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAS67788
UniProt:
A0A0P0URT6
LinkDB
All DBs
Position
756329..756985
Genome browser
AA seq
218 aa
AA seq
DB search
MDKLQKKINYQFKDINLLKQALTHRSVGKNNNERLEFLGDSILGVVVARELYQRFSGIGE
GKLSRFKSYVVRGQTLGLIAAELKLSNLLILGSGELKSGGHNRKSIQADAVEAILGAIFL
EAGYKTVSEVILDLFKVYLDDINPNDTLKDFKTKLQERLQKFRQTLPQYTLVKTTGKDHN
ALFTVRCLLQDQKIQVEQEAKSIKRAEQMCAEILLEKL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggataaattacagaaaaaaattaattatcaatttaaagacataaacttgttgaaacag
gcgttgacgcatcgtagtgtcggtaaaaacaacaatgagcgtttagagttcttaggtgat
agtattttaggcgtggtggttgcacgagagttgtatcagcgtttttcagggattggcgaa
ggtaaattatctcgttttaaatcttatgtggtgaggggtcaaactttaggattaattgcc
gcagagcttaaattatcaaatttattgattttaggatcaggcgaattaaaaagtggcggg
cacaatcgaaaatctattcaagctgatgcggttgaggcgattttgggcgctattttttta
gaggctggatataaaacagtgagcgaagtgattttggatttattcaaagtttatcttgat
gacattaatccaaatgatactttgaaagattttaaaacaaaattacaagagcgcctacag
aaatttaggcaaaccttaccacaatatactttggttaaaaccacaggtaaagatcataat
gccttatttacggttagatgcctattgcaagatcagaaaatacaagttgagcaagaagct
aagagcatcaaaagagctgagcagatgtgtgctgaaattttattggagaaattatga
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