Endosymbiont of Bathymodiolus septemdierum: BSEPE_1003
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Entry
BSEPE_1003 CDS
T04606
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebh03032
]
BSEPE_1003
03036 Chromosome and associated proteins [BR:
ebh03036
]
BSEPE_1003
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_1003
DNA replication proteins [BR:
ebh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSEPE_1003
Chromosome and associated proteins [BR:
ebh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BSEPE_1003
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BSEPE_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAS67994
UniProt:
A0A0P0USC9
LinkDB
All DBs
Position
complement(957009..957284)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIDAIASAANLSKADAGRALNATTGAITSAMAKGDGVQLTGFGSFVVRDRAARTG
RNPQTGAAIQIKASKVAAFKAGKALKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattaattgatgcaatcgcatcagcagcaaatctttctaaagcggac
gcaggtcgtgcgttgaacgctactacaggtgctatcactagtgctatggctaaaggcgac
ggcgtacagttgactggctttggctctttcgtagttagagaccgtgcagcacgcacaggt
cgcaatccacagactggtgctgcaattcaaattaaagcatctaaagtggctgcatttaaa
gctggaaaagcacttaaagacgctgtaaacggttaa
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