Endosymbiont of Bathymodiolus septemdierum: BSEPE_1184
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Entry
BSEPE_1184 CDS
T04606
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh00260
Glycine, serine and threonine metabolism
ebh00630
Glyoxylate and dicarboxylate metabolism
ebh00670
One carbon pool by folate
ebh00785
Lipoic acid metabolism
ebh01100
Metabolic pathways
ebh01110
Biosynthesis of secondary metabolites
ebh01200
Carbon metabolism
Module
ebh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BSEPE_1184 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSEPE_1184 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BSEPE_1184 (gcvP)
00670 One carbon pool by folate
BSEPE_1184 (gcvP)
Enzymes [BR:
ebh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
BSEPE_1184 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAS68172
UniProt:
A0A0P0UTF9
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All DBs
Position
complement(1150823..1153627)
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AA seq
934 aa
AA seq
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MSDFLDRHIGPSEADIASMLSAIGQESVDAVISKTVPKSILFGNRMDMDEGMSERDTLAL
ATELAGQNTIATNFIGQGYYGTLMPSVIQRNILENPGWYTAYTPYQAEISQGRLEMLLNF
QQMIMDLTGMDISNASLLDEPTAAAEAMMMAKRANRKNKSNNFLVDSNTNPQTITILQTR
AKPLGIELLVEDIKGNDFADCFAVLMQSPGTNGEVRDLSDDIAKAKAQGALTIVACDLLA
LTLIKTPAEMGADIAIGNSQRFGVPMGFGGPHAAFLATRDAFKRMVPGRLIGVSQDVLGN
PAMRMSLQTREQHIRRDKATSNICTAQVLLAVLAAAYGIYHGAKGLKNIATKVHLKATTL
AKSLTSVGFDLVSDAFFDTITINTDKAQTLFTRAQEKGINLRLLGDNQLTIAVDETTTDE
ELSALLLVFSITDVAYGSVNLDATMSRDSEYLTHPVFSLYHSETEMMRYLKRLENKDIAL
NHSMIALGSCTMKLNAATQMYPISLPGFSQLHPYAPVEQTQGYQQLFKDLARALAQVTGY
DAVSLQPNAGSQGEFAGLLAIHAYHDSRGDSQRNICLIPSSAHGTNPASAVMAGMKVVIV
KCDKSGNIDIDDLQQKAEKHADNLSAIMVTYPSTHGVFEVEIKNICDIIHAKGGQVYLDG
ANLNAMVGITRMGEFGADVSHINLHKTFAIPHGGGGPGMGPIGVKAHLAEFLPGDPLIKD
SNAVSAAMYGSASILPISWSYIKLLGKQGMQRSTEIAIVSANYIADELKDYFPILYRGNQ
GMVAHECIIDIRPLKEQSGISEEDIAKRLMDYGFHSPTMSFPVAGTLMIEPTESESKREI
DRFITAMVSIHSEIQKVISGEWDKDNNPLKNAPHTAVEMAGEWHYPYTRTDALYPVESLL
ANKYFPPVKRIDNVYGDRNLFCSCITTEAFENLS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttttagacaggcacattgggccaagtgaggcagatattgcttcaatgtta
tctgctattgggcaggaatcagttgatgctgtgatatctaaaacggtacctaagtcgatt
ttgtttggcaatcggatggacatggatgagggtatgagtgaacgagatacgctggcatta
gcaactgaattggcggggcagaataccattgcaacgaactttatcgggcagggatattat
gggactttgatgccgagcgttattcaacggaatattttggaaaatccaggttggtatacg
gcttatacgccatatcaggcggagatttctcaggggcgtttggaaatgttgctcaatttc
cagcaaatgattatggatttaacggggatggatatttccaatgcctcgttgttggatgag
ccaacagctgctgcggaagcgatgatgatggcgaaacgcgccaatcgtaagaataaatcg
aataattttttagttgacagtaataccaatccgcagacgattacaattttgcaaacgcgt
gcgaagccgttgggaattgagttgctggtagaagatattaagggtaatgattttgccgat
tgttttgcggtattgatgcaatcaccagggacgaatggcgaagtgcgtgatttaagcgat
gatattgccaaggcaaaagcgcaaggggctttgacaattgtagcctgcgatcttttggca
ctaactttgattaaaacgccagcggaaatgggcgcggatattgccattggcaattcacaa
cgatttggtgtgccgatgggttttggtggtccacacgctgcatttttggcgacccgtgat
gcatttaaacgaatggtgccagggcgacttattggcgtatcgcaagatgtactgggtaat
cctgcaatgcgtatgtcgttgcaaacgcgagagcaacacattcgtcgtgacaaggcgacc
agtaatatctgtacagcacaagttttgttggcagtgttggcggcggcgtatggcatttat
catggtgcaaaagggctgaaaaacattgcgaccaaggtgcatttgaaagccacaacgctg
gcaaaaagtttgacaagtgtaggttttgatttggtaagcgatgcgttttttgatacgatt
acgattaatacagataaagcacaaacgctgtttacacgagcacaagaaaaaggcattaat
ttacgcttgttgggtgataatcaattgacaattgcagtggatgaaactacgacagatgag
gagttatcggcgttgttattggtattttcaattactgatgtggcttatggttcagtaaat
cttgatgcgactatgtccagagattctgagtatttaacacatcctgtattcagcttgtat
cactcggaaacggaaatgatgcgttatttgaagcgcttggaaaataaagatattgccctt
aatcattcaatgattgcactcggctcttgcacgatgaagctcaatgcagcgacacaaatg
tatccaatttcactaccaggattttcgcaattacacccgtatgcacctgtagaacagacg
cagggctatcaacaattatttaaagatttggcacgcgcattagcacaagtgacgggttac
gatgctgtgtcattacagccaaatgcaggctcgcagggcgaattcgcagggctacttgct
attcacgcctatcatgattctcgtggcgattcacagcgtaatatttgcctaattccttcc
tcggcacacggtacaaaccctgctagtgcggtaatggcaggaatgaaggtggtgattgtg
aaatgtgataagtctggcaatattgacattgacgatttacagcaaaaagcagaaaagcat
gcggataatttgtcagcgattatggtaacttatccatcaactcacggcgttttcgaagta
gagattaaaaatatttgcgatattattcacgctaaaggcggacaagtgtatttggatggt
gcgaatttgaacgcgatggtcggcattacccgtatgggcgagtttggtgcggatgtgtcg
catatcaatctacacaaaacttttgccattccacatggtggtggcggtcctggtatgggt
cctatcggtgttaaagcacatttggcggagtttttgccaggtgacccattgattaaagat
tcaaatgctgtgtcagcagcgatgtatggttcagcgtcaattttgccaatttcttggtcg
tatattaagttgctgggtaagcaaggtatgcaacgctcgactgagattgcgattgttagc
gctaactatattgccgatgaattaaaagactattttccaatcctctatcgtggcaatcaa
ggtatggtagcacacgagtgcattattgatattcgcccgttaaaagaacaaagtggtatc
agcgaagaagacattgccaaacgcttaatggactatggttttcattcgccgaccatgtca
tttcccgtcgcaggcacgctgatgattgagccaacagagagcgaatcaaaacgcgaaata
gataggtttattaccgcaatggtcagtattcatagtgaaattcaaaaggtgatttctggc
gagtgggataaggacaataatccactgaaaaatgcaccgcacaccgccgtagaaatggca
ggagagtggcattacccatatacaagaacagatgctttatacccagttgagtcgctattg
gccaataagtatttcccaccagtgaagcgaattgacaatgtgtacggcgacagaaattta
ttttgttcgtgtattactaccgaagcgtttgaaaatttaagttaa
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