Endosymbiont of Bathymodiolus septemdierum: BSEPE_1273
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Entry
BSEPE_1273 CDS
T04606
Name
(GenBank) tRNA-specific 2-thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BSEPE_1273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebh03016
]
BSEPE_1273
Enzymes [BR:
ebh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BSEPE_1273
Transfer RNA biogenesis [BR:
ebh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BSEPE_1273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_2
ThiI
tRNA_Me_trans
QueC
Motif
Other DBs
NCBI-ProteinID:
BAS68257
UniProt:
A0A0P0UTJ0
LinkDB
All DBs
Position
complement(1228214..1229257)
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AA seq
347 aa
AA seq
DB search
MSKQIKAVSLISGGLDSLLSTKLLLDQGIHVEGINFFTGFCVEGHTHAIRKQKSDKPKRN
NALWVAEQLGIKLHIIDVIEEYRDVLLNPKHGYGKNMNPCLDCKGFMVKKAKQWMLKNDF
DFIITGEVMGQRPMSQRKETMPIVQRESGADDLLLRPLCAKHLPETKAEIEGWVDREKLL
DFSGRTRKPQMVLAKQYGFEDYATPAGGCCFLTDKQYSDKLVDMWASRGNREYELDDLMM
LKVGRHIRPNKRFKMIVAREEGEVKFLEGYRNQYANLYPTSCNGPLALIDGEPNQEDVKI
AARILARYSQGREEESVDVEVKLKVGVAQQFSVKPLSADEIKKEWMV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaattaaagcagtatcgttgatttcaggtgggttagattcactattgagc
accaaattattattagaccaaggtattcatgtggagggtattaacttctttacaggtttt
tgcgtggaagggcatacacatgcgattcgcaaacaaaaatcagataagccaaaacgtaat
aatgccttatgggttgctgaacaattggggattaaattacatattattgatgtgattgaa
gaatatcgtgatgtgttacttaacccaaagcatggctacggaaaaaatatgaatccatgc
cttgattgtaagggttttatggttaaaaaagccaaacagtggatgctaaaaaatgatttt
gattttatcattactggcgaagtgatggggcaacgcccaatgtcgcaacgcaaagaaacc
atgccaattgtgcaaagggagtcgggtgctgatgatttattattacgacctttgtgcgct
aagcatctgccagaaaccaaagcggagattgaaggttgggtggatagagaaaaattgtta
gatttttcaggtagaacccgaaaaccacaaatggtactcgccaaacaatatggctttgaa
gactatgcgacccctgcggggggttgttgctttttaacggataaacaatactccgataaa
ttggtagatatgtgggcgtctcgtggcaaccgtgaatatgaattagatgatttaatgatg
cttaaagtcggtaggcatattcgtcctaataagcgctttaagatgattgttgccagagaa
gagggtgaggtgaaattcttagaaggctaccgtaatcaatatgcaaacttatatcccacc
agttgcaatggacctctggctttaatcgacggtgaacctaaccaagaagatgtcaaaatc
gctgctcgtatattggcacgctattcgcaagggcgtgaagaagagtcagttgatgtagag
gtaaaactcaaagttggcgtggcacagcagtttagtgttaagccactttctgctgatgaa
atcaaaaaagagtggatggtatag
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