Erwinia billingiae: EbC_01930
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Entry
EbC_01930 CDS
T01270
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ebi
Erwinia billingiae
Pathway
ebi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EbC_01930 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebi03019
]
EbC_01930 (rhlB)
Enzymes [BR:
ebi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EbC_01930 (rhlB)
Messenger RNA biogenesis [BR:
ebi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EbC_01930 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
CAX57724
UniProt:
D8MKR8
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All DBs
Position
complement(219312..220604)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSNPAPEGRQVNQPRALILAPTRELAVQIHADAEPLTQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSFRVRELAFENMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLA
CEEYALNLPAIEEYIGHSITVSRYNSDALMTELPPPKRLTRHRSGNGPRRGGNNNRRSSA
PRNNNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaaccgaacagaagttttccgacttcgccctgcaccctcaggtg
attgaagcccttgaaactaaaggctttcataactgcacgccgattcaggcgctggcattg
cctttcacgctctcagggcgtgatgtagcgggacaggcgcaaaccggtaccggaaaaacg
atggcgttcctgacgtcaacgttccatcatcttctttctaaccctgcgccagaaggccgt
caggtgaatcagccacgtgcgctgatcctggcccctacgcgcgaattagccgtacagatc
catgccgatgctgaaccgctgacgcaggcaaccggtctcaagcttgggcttgcttatggc
ggtgacggctacgataagcagctgaaagtgctggaaagcggtgtcgatattttaatcggc
accacgggccgactgattgactataccaagcaaaatcacgttaacctcggcgccattcag
gtggttgtgctcgatgaagcggatcgcatgttcgatctcggctttattaaagatattcgt
tggctgttccgccggatgcctgcggcaaatcagcgtctgaacatgctgttctccgcgacc
ctctctttccgtgttcgcgaactggcgttcgaaaacatgaacaacgcggaatatgtggaa
gtggaacccgagcagaaaaccggccaccgcatcaaagaagaacttttctatccttctaat
gaagagaagatgcgcctgctgcaaaccttgctggaagaagagtggccagatcgtgccatt
atcttcgcgaacaccaagcaccgttgtgaagatgtctggggccacctggcagcagatgga
caccgtgttgggctgttgaccggcgatgtggcacagaagaaacgtctgcgtattttggat
gacttcactaaaggtgatgttgatatcctggtcgccaccgacgttgccgcgcgtggcctg
catatccctgcggtaacccacgtgttcaactatgacctgccggatgaccgtgaagactac
gtgcaccgtattggtcgtaccggacgcgctggcgccaatggacattctatcagcctggcg
tgtgaagagtacgcgctgaatctgcctgctatcgaagagtatattggccacagcattacc
gtgagccgctataacagtgatgcgctgatgactgaactgccgccaccgaagcgtttaaca
cgtcatcgttctggcaatggtccacgtcgtggcggcaacaacaatcgccgcagcagtgca
ccacgcaacaataaccgtaaacgttcaggttaa
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