Erwinia billingiae: EbC_02210
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Entry
EbC_02210 CDS
T01270
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebi
Erwinia billingiae
Pathway
ebi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EbC_02210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebi03019
]
EbC_02210 (recQ)
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_02210 (recQ)
Enzymes [BR:
ebi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EbC_02210 (recQ)
Messenger RNA biogenesis [BR:
ebi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EbC_02210 (recQ)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EbC_02210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAX57752
UniProt:
D8MKU6
LinkDB
All DBs
Position
251826..253652
Genome browser
AA seq
608 aa
AA seq
DB search
MSTAVINQEALAEQVLQETFGYQHFRPGQQSIIQASLNGRDCLVVMPTGGGKSLCYQIPA
LVREGLTLVVSPLISLMKDQVDQLLANGVSAACLNSTQTREEQQEVMAGCRTGKVRLLYI
APERLMMDNFLDNLLHWNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALT
ATADETTRNDIARLLQLDDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGII
YCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGIN
KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALMLYDPADMAWLRRCLDEKAPGPLQ
DIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCDNCDICLDPPRRYDGLVEAQKALS
GIYRVGQRFGMGYIVEVLRGANNQRIRDMQHDKLPIYGIGKDQSHEHWVSVLRQLIHLGL
VTQNIAMHSALQLTEAARPVLRGEASLMLAVPRLVTVKTRSSSQKSYGGNYDRKLFAKLR
KLRKAIADENNVPPYVVFNDASLIEMAEQMPITASEMLGVNGVGQKKLERFGKPFMVMIR
DHVDGDEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacggcagttattaatcaggaagcgctggcggaacaggtactgcaagagaccttc
ggctaccagcactttcgcccaggacaacaatcgatcattcaggcctcactgaacgggcgt
gactgcctggtcgttatgccgaccggcggcggtaagtcgctctgctatcaaatccctgcg
ctggtaagagaaggcctgacgctggtggtctctccgctgatctcgctgatgaaagatcag
gtggatcagctgctggctaacggcgtttcggccgcttgcctcaactccacccagacccgt
gaagagcagcaggaggtgatggccggttgccgtacgggtaaagtgcggctgctgtatatc
gcgcctgaacgcctgatgatggataacttcctcgacaatctgctgcactggaatccagcc
atgctggcggtcgatgaagcgcactgtatttctcagtggggccatgatttccgtcctgaa
tacggcgccctgggccagctacgccagcgcctgcctgatgtgccggtgatggccctgacg
gccacggcggatgaaaccacccgcaatgatattgcgcgtctgcttcagctggacgatccg
ctgatccaaatcagcagcttcgaccgcccgaatatccgctacacgctggtcgaaaaattc
aaacccaccgagcagctgctccgctacgtgcaggatcaacggggcaagtgcggcatcatt
tactgtaacagccgggcgaaggtggaagacaccgccgccaggttgcaaagccgtgggctg
agcgtcggcgcctatcatgccgggatggacaatgcccatcgcgcgcaggttcaggaagca
ttccaacgcgatgacctgcaaatcgttgtcgccacggtggcgttcggcatgggcatcaac
aagcccaacgtacgctttgtggtgcactttgatatcccacgcaacatcgagtcctattat
caggaaaccggacgcgccgggcgcgatggcctgcctgccgaagccctgatgctgtacgat
ccggccgatatggcctggctgcgccgttgcctggatgaaaaagcgccgggtccgttgcag
gacattgagcgacacaagctgaacgctatgggtgcctttgcggaagcgcaaacctgccgt
cgactggtgctactgaattactttggcgaaggtcgtcagcagccttgcgacaactgcgat
atctgcctggatccgccacgccgttatgatggtctggtggaagcgcagaaagcattatcc
ggtatttatcgcgttgggcagcgttttggtatgggctacattgttgaagtgctgagaggc
gcgaacaatcagcgtattcgcgatatgcagcacgataaattgccgatttacggcattggt
aaagatcagagccatgaacactgggtgagcgtgctgcgtcagctgatccacctcgggctg
gtgacgcaaaacattgcgatgcactctgccctacagcttacggaagcggcccggccggtc
ctcaggggcgaagcctcactgatgctggcggtgccaaggctggtaacggtcaaaacccgc
agcagcagccagaaatcttacggcggcaattacgatcgcaagctgttcgccaagctgcgt
aaattacgcaaagcgattgccgacgaaaacaacgtcccgccgtatgtggtgttcaacgat
gcctcgctgattgaaatggccgagcagatgccgatcaccgcatcagagatgctgggcgtc
aacggggtagggcagaagaagctggagcgatttggtaaaccgtttatggtgatgatccgg
gatcacgtcgatggtgacgaagagtaa
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