Erwinia billingiae: EbC_02590
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Entry
EbC_02590 CDS
T01270
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ebi
Erwinia billingiae
Pathway
ebi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EbC_02590 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebi03021
]
EbC_02590 (rpoB)
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_02590 (rpoB)
Enzymes [BR:
ebi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EbC_02590 (rpoB)
Transcription machinery [BR:
ebi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EbC_02590 (rpoB)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EbC_02590 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF8806
iRhom1-2_N
Motif
Other DBs
NCBI-ProteinID:
CAX57790
UniProt:
D8MKY4
LinkDB
All DBs
Position
298582..302610
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQHGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFDKIVYEIRDNKLQME
LVPERLRGDTASFDIESNGTIYVEKGRRITARHIRQLEKDGIEHIEVPVEYIAGKVVAKD
YVDESTGELIVAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGAYISETVRVDPTSDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIQVMRKLIGIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVREGVVT
DEIHYLSAIEEGNYVIAQANTNLDDEGHFVDDLVTCRSKGESSLFSRDQVDYMDVSTQQI
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTIIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRISYLLVAGGVEAEKLEKLPRERWLELGLTDEDKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVSK
LREFIQRAYDLGSDLRQKVDLNTFTDDEVLRLAENLKKGMPIATPVFDGAKESEIKELLQ
LGGLPSSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggaaagcgcccccag
gtgctcgacattccttatctcctttctatccagcttgactcgttccagaagttcatcgag
caagacccggaaggtcaacatggtttggaagcggctttccgttccgtattcccaatccaa
agctatagcggtaattctgaactgcagtacgtcagctaccgtttaggcgaacctgttttt
gatgtgaaagagtgtcagattcgtggcgtcacgtactctgcacccctgcgcgtaaaactg
cgcctggtgatctacgagcgcgaagcgccggaaggcaccgttaaggacatcaaagaacaa
gaagtttacatgggtgaaattccactcatgaccgataacggtacctttgtcatcaacggt
acagaaagggttatcgtttctcagctgcatcgtagtcctggtgtcttcttcgacagcgat
aagggtaaaacccactcatcgggtaaagtgctttataacgcacgtatcattccttaccgt
ggttcatggttggactttgagttcgacccgaaagacaacctgttcgttcgaattgaccgt
cgccgtaaattgcctgcgaccatcattctgcgtgcactgaattacaccactgagcagatc
cttgacctgttctttgacaaaatcgtgtatgaaatccgcgacaacaagctgcagatggaa
cttgttcctgagcgcctgcgtggagacactgcctcattcgatatcgaatccaacggtact
atctacgttgagaaaggccgtcgtattactgcacgtcatatccgtcagctggaaaaagat
ggcattgagcacatcgaagttcctgttgaatacatcgccggcaaagtcgttgctaaagac
tatgttgacgagagcaccggtgagctgatcgttgctgccaacatggagctgtcgctggat
ctgctggctaagctgagccagtctggtcacaagcgcatcgaaacgctgttcaccaacgac
ctggatcacggtgcgtacatttccgaaaccgtccgcgtcgacccaaccagcgatcgcttg
agcgcactggttgagatctaccgcatgatgcgccctggtgaaccaccaacgcgcgaagcg
gctgaaaacctgttcgagaacctgttcttctctgaagaccgctacgatctgtctgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgtgacgagatcgaaggttccggtattctg
agcaaagacgacatcatccaggtgatgcgtaaactgatcgggatccgtaacggtattggc
gaagtggatgatatcgaccacctcggcaaccgtcgtattcgttccgttggcgaaatggca
gaaaaccagttccgtgtcggtctggtccgtgttgagcgtgcggtgaaagagcgtctgtct
ttaggcgatctggataccctgatgcctcaggacatgatcaacgccaagccaatttctgca
gcagtgaaagagttctttggttccagccagctgtcccagtttatggaccagaacaaccca
ctgtctgagattacgcacaaacgtcgtatctctgcacttggcccgggcggtctgacgcgt
gagcgtgcaggctttgaagttcgagacgttcacccgacgcactacggtcgcgtgtgccca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccttgtccgtgtacgcacag
accaatgagtacggtttcctggaaaccccataccgtcgcgttcgcgaaggcgtggtgacc
gacgaaattcattacctctctgcaattgaagagggtaactacgttatcgctcaggctaac
accaacctcgacgacgaaggtcacttcgtagacgatctggttacttgccgtagtaaaggc
gaatcgagcttgttcagccgcgatcaggttgactacatggacgtatccacccagcagatc
gtttctgttggtgcgtcactgatcccgttcctggagcacgatgacgccaaccgcgcattg
atgggtgcaaacatgcaacgtcaggcggttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgcgcggtagcggttgactccggtgttacagccgtagcaaaacgt
ggtggtactgttcagtacgtggatgcatcccgtatcgttatcaaagttaacgaagacgaa
atgtacccaggcgaagccggtatcgacatttacaacctgaccaaatacacccgttctaac
cagaacacctgcatcaaccagatgccttgcgtgaacctgggtgagccaattgaacgtggt
gatgtgctggctgatggtccttcaacggatctcggcgaactggcactgggtcagaacatg
cgcgtcgcgttcatgccttggaacggctacaacttcgaagactccatcttagtctccgag
cgtgtggtacaggaagatcgcttcaccaccatccacattcaggaactggcatgtgtgtct
cgtgacaccaagttggggccggaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaagctggatgaatccggtatcgtttatatcggtgctgaagtgaccggcggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccagaagagaag
ctgttacgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggcgtatcaggcaccattattgatgtgcaggtcttcacccgcgatggcgtggaa
aaagacaagcgcgcgctggaaatcgaagagatgcagctgaagcaggcgaagaaagacctg
tctgaagaattgcagatcctcgaagctggcctgtttagccgtattagctacctgctggtt
gccggtggcgttgaagcggaaaaactggaaaagctgcctcgcgagcgctggttggaactc
ggcctgaccgacgaagacaagcaaaaccagctggaacagctggcagagcagtacgacgag
ctgaagcacgagtttgagaagaaactcgaagcgaagcgccgcaaaatcactcagggcgat
gacctggcacctggcgtgctgaaaatcgttaaagtgtatctggccgttaaacgtcagatc
cagcctggtgacaagatggctggtcgtcacgggaacaaaggtgttatctccaagatcaac
ccgatcgaagatatgccatacgatgagaacggtacgccggtcgacatcgtactgaacccg
ctgggcgtaccatcacgtatgaacattggacagattcttgaaacccacctgggtatggct
gcgaaaggtattggcgagaagatcaacgccatgcttaagaagcaggaagaagtgtctaag
ctgcgtgagtttattcagcgtgcgtacgatctgggctccgatttacgtcagaaagtcgat
ctgaacaccttcaccgacgacgaagtgctgcgtctggcagaaaacctgaagaaggggatg
ccaatcgcaacaccagtgtttgacggcgcgaaagaaagcgaaatcaaagagctgttacag
ctcggcggcctgccttcttctggtcagatcacgctgtttgatggtcgtactggcgagcag
ttcgagcgtcaggttaccgttggctacatgtacatgctgaaactcaaccacttagtggat
gacaagatgcatgcacgttctaccggctcttacagcctcgttactcagcagccgctgggt
ggtaaggcgcagttcggtggacagcgattcggtgagatggaagtgtgggcactggaagca
tacggtgccgcttataccctgcaggaaatgctgaccgtgaagtctgatgacgttaatggc
cgtaccaagatgtataaaaacatcgtggacggtaaccatcagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagagatccgctcgctgggtattaacatcgagctggaa
gacgagtaa
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