Erwinia billingiae: EbC_10110
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Entry
EbC_10110 CDS
T01270
Symbol
hopD
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ebi
Erwinia billingiae
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebi03032
]
EbC_10110 (hopD)
03036 Chromosome and associated proteins [BR:
ebi03036
]
EbC_10110 (hopD)
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_10110 (hopD)
DNA replication proteins [BR:
ebi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EbC_10110 (hopD)
Chromosome and associated proteins [BR:
ebi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EbC_10110 (hopD)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EbC_10110 (hopD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAX58542
UniProt:
D8MNY5
LinkDB
All DBs
Position
1185285..1185557
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAASADISKAAAGRVLDAFMGSVSDSLKEGDEVALVGFGTFSVRERSERTG
RNPQTGKEITIPAGKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacagttgatcgacaaaattgctgcaagcgccgacatttctaaagcggca
gcgggacgtgttttagatgctttcatgggctcagtgtcagattcactgaaagaaggcgat
gaagttgcactggtaggcttcggcacgttctccgtgcgtgagcgctcagagcgtaccggc
cgtaacccacagaccggtaaagaaatcaccatcccagcgggtaaagtaccaggcttccgt
gccggtaaagcgctgaaagacgccgttaactaa
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