Erwinia billingiae: EbC_23680
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Entry
EbC_23680 CDS
T01270
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ebi
Erwinia billingiae
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebi03032
]
EbC_23680 (topA)
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_23680 (topA)
Enzymes [BR:
ebi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EbC_23680 (topA)
DNA replication proteins [BR:
ebi03032
]
Prokaryotic type
DNA Topoisomerases
EbC_23680 (topA)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EbC_23680 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
CAX59899
UniProt:
D8MSU2
LinkDB
All DBs
Position
complement(2677449..2680133)
Genome browser
AA seq
894 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTVKKSADSTTSKPAKKVK
KDEKAALVSRMGVDPFHGWEADYQILPGKEKVVAELKALAENADHIYLATDLDREGEAIA
WHLREVIGGDDSRFSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFTPEEYWELHADLNTPKGTGLPMEVTH
QHDKPFRPVNGEQTHAAVSLLEKARYVVADREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIETEFGAKYLPKAANVYSSKEN
SQEAHEAIRPSDVAIQSEQLKDMEADAQKLYQLIWRQFVACQMMPAQYDSTTLTVAAGDF
KLKAKGRTLRFDGWTAVMPALRKGDEDRTLPPVEVGEELKLQQLKPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYASIISTIQDRGYVRVESRRFYAEKMGEIVTDRLEANFRELMNY
DFTAHMEDNLDKVANNEAQWKGVLDQFFADFSQQLEKADKDPEEGGMQPNQMILTSIDCP
TCNRKMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNILEGDDAETNALRARH
RCQKCGTAMDSYLIDNQRKLHVCGNNPGCDGYEIEQGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNEECKNTRKILRNGDVAPPKEDPVPLPELTCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELQRFRDRLPEKLSYLADAPVSDEEGNKAVVRFSRKTKQQYV
STEKDGKATGWSAFYVDGKWEVASKATATKAAPVKAAANKATATKATAKKAAKK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagctctcgtaatagttgagtccccggcaaaagccaaaacgatcaataaatat
cttggaaatgactacgtggtgaagtccagcgtcggtcatatccgggatttgccgaccagt
ggatcaacagttaaaaagagcgctgactctacaaccagtaaaccagcaaaaaaagtcaaa
aaggacgagaaagcggcgcttgtcagccgcatgggcgtcgatccttttcatggttgggaa
gcggattaccaaatccttcctggcaaagagaaagtggttgcagagctgaaggctctggcc
gaaaacgctgaccacatctatctcgcaacggaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggtggcgatgactcacgcttcagccgcgtggtgtttaac
gaaatcaccaagaatgcgattcgtcaggcgtttgaaaagccgggtgaactgaatattgac
cgtgtgaatgcgcaacaggcacgccggtttatggaccgcgtagtgggctatatggtttcc
ccgctgctgtggaaaaaaattgcccgtggactgtctgctggccgcgtccagtctgtggcc
gtgcgtctggtggttgagcgtgagcgcgaaattaaagcgttcaccccagaagaatactgg
gaactgcacgccgacctgaacacgccgaaaggcaccggtctgccgatggaagtcacgcat
cagcatgacaagccattccgcccggtcaacggcgagcagacccatgctgcggttagtctg
ctggaaaaagcccgctatgtggtggccgatcgtgaagataagccaaccagcagcaagcca
ggcgcgccgtttatcacctccacgctgcaacaggcggcaagtacccgtttgggttacggc
gtgaagaaaaccatgatgatggcacaacgcttgtatgaagcgggtcacatcacttacatg
cgtactgactcaacgaatttgagccaggatgcggtcagcatggttcgcggctacattgaa
actgagtttggcgcgaagtacctgccgaaagccgccaatgtgtacagcagcaaagaaaac
tcgcaggaagcgcacgaagcgattcgtccttctgatgtggctattcagtccgagcagttg
aaggatatggaagccgatgcgcagaaattatatcagctgatctggcgccagtttgtcgcc
tgtcagatgatgccagcgcagtatgactccaccacgctgaccgtggcggctggagacttc
aaactgaaggccaaaggccgtacgctgcgttttgatggctggacggcggtgatgcctgcg
ctgcgtaaaggcgatgaagaccggaccttaccaccggttgaagtgggcgaagagctgaag
ctgcaacagctgaagccaagtcagcacttcaccaagccaccggctcgcttcagcgaagcg
tcgctggtgcgcgagctggaaaaacgcggtatcggtcgtccttctacctatgcgtcgatt
atctcgaccattcaggatcgtggttacgtccgcgttgagagccgtcgtttctatgcggag
aaaatgggtgaaatcgttaccgatcgtctggaagctaacttccgcgagctgatgaactac
gattttaccgcgcatatggaagacaacctcgataaggttgcgaataacgaagcgcagtgg
aaaggcgtgctggatcagttctttgctgacttcagccagcagctggaaaaagcggataag
gatcctgaagagggtggcatgcagccgaaccagatgatcctgacctcgattgactgcccg
acctgtaaccgcaaaatgggtatccgtaccgcaagtaccggtgtgttcctcggttgttca
ggttatgcattaccaccaaaagagcgttgtaagcagaccatcaacttaatccctgagaat
gaagtgctgaatattcttgagggtgatgatgctgaaaccaacgcgctgcgtgcccgtcat
cgttgccagaagtgtggcactgcgatggacagctacctgatcgacaaccagcgtaagctg
cacgtctgtggtaacaacccaggctgtgatggttatgagatcgaacagggtgaattccgc
atcaagggctacgatggcccgattgttgagtgcgaaaaatgtggttctgaaatgcacctg
aaaatgggacgtttcggtaagtacatggcctgtaccaacgaggaatgcaaaaacacccgt
aagatcctgcgtaatggcgatgttgcgccaccgaaagaagatccggtgccgttgccagag
ctgacctgtgagaagtcagatgcgtatttcgtgctgcgtgacggtgctgctggcgtgttc
ctggcagccaacaccttcccgaaatcacgcgaaacacgtgcgccgctggtggaagagctg
caacgcttccgcgatcgtctgcctgaaaaactgagctatctggccgatgcgccggtcagc
gatgaagaaggcaacaaagcggtcgtgcgtttcagccgtaaaaccaaacagcagtacgtc
agtaccgagaaagacggtaaggcgacgggttggtcagcgttttacgttgatggcaaatgg
gaagtcgccagcaaagcgaccgcgaccaaagccgctccggttaaagctgccgccaataaa
gccacggccaccaaagccactgcgaaaaaagcggcgaagaagtaa
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