Erwinia billingiae: EbC_24440
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Entry
EbC_24440 CDS
T01270
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ebi
Erwinia billingiae
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebi03016
]
EbC_24440 (rnd)
Enzymes [BR:
ebi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EbC_24440 (rnd)
Transfer RNA biogenesis [BR:
ebi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EbC_24440 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAX59975
UniProt:
D8MT18
LinkDB
All DBs
Position
complement(2757839..2758960)
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AA seq
373 aa
AA seq
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MNYTMITTNEALAELCLTARQFPALALDTEFVRTRTYYPGLGLIQMYDGENIALIDPLPI
TEWAPFRDLLLDEKVIKFLHAGSEDLEVFLHEYDVLPVPMIDTQILAAFTGRPLSCGFAT
IVESFTGIALDKSESRTDWLARPLTEKQCQYAAADVFYLLPIAHKLLAEAEESGRINAAL
NECSLLCQRRQMVVAPQEAYRDITNAWQLRPRQLAALRLMAAWRLELAREKDMAVNFVVR
EENLWKVARYMPGSLGELDHLGLAGQEIRFHGKALVAMVAQANALEESELPEPVANLIDN
SDYKKVFKELKALMAEVAEKEGISQELLASRRQINQLLSWHWKLKPRDRKPELIDGWRGE
LLHDGIAEILKAY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaactacaccatgataaccaccaacgaggcgctggctgaactttgcctgaccgcccgt
cagtttccggcgctggcgctggataccgaattcgtcagaacccgcacctattatcctggc
cttggcctgatccagatgtatgacggcgagaatatcgcgctgatcgatcctctgccgatc
accgaatgggcgccattccgcgatctgctgctcgatgagaaggtgatcaagttcctgcac
gctggcagtgaagatctggaagtcttcctgcatgaatatgacgtgctgccggtgccgatg
attgatacgcagattctggctgcctttaccggccgtccactttcctgcggatttgccacc
attgttgaatcctttaccggtatcgcgctggataaaagcgaatcacgcactgactggctg
gcgcgtccgctgaccgagaagcagtgtcagtatgcggccgctgatgtgttctacctgctg
ccgattgcccataagctgctggcggaagccgaagagtcgggcaggattaatgccgcactg
aacgaatgcagcctgctgtgtcaacgccgtcaaatggtggtggccccacaagaggcttac
cgtgacattaccaatgcttggcaactgcgtccgcgtcagcttgctgcactgcgtctgatg
gcggcatggcggctggagctggcacgtgaaaaggacatggcggtgaatttcgtggtgcgc
gaagagaacctgtggaaagtggcgcgctatatgcctggttccctcggcgagctggatcac
cttgggcttgccggtcaggaaattcgtttccacggtaaagcgctggtggcgatggttgct
caggcgaatgcgctggaagagagcgagttgccggaaccggtcgctaacctgattgataat
tctgactacaagaaagtcttcaaagagctgaaagcgttgatggcggaagtggcagaaaaa
gagggtattagtcaggagttgttggcgtcacgtcgtcagattaaccaactgctgagctgg
cactggaaattaaaaccacgggacagaaaacccgagctgattgatggatggcggggcgag
ctgcttcacgacgggatcgctgaaatcctgaaggcatactga
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