Erwinia billingiae: EbC_34220
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Entry
EbC_34220 CDS
T01270
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ebi
Erwinia billingiae
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebi03009
]
EbC_34220
Enzymes [BR:
ebi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EbC_34220
Ribosome biogenesis [BR:
ebi03009
]
Prokaryotic type
rRNA helicases
EbC_34220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAX60953
UniProt:
D8MVU6
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All DBs
Position
3804553..3805884
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AA seq
443 aa
AA seq
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MTVTTFSELELDESLLKALQEKGYTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAKYTHLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVESLILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGDAIKDFSERLLNEPEEIEADPARRERKKILQWYYRADDVKHKTALLI
HMLKQPEVTRSVVFVRKRERVHELCGWLREAGINTSYLEGELEQFKRNEAIKRVVDGRVN
VLVATDVAARGIDIEDVSHVFNFDMPRTSDTYLHRIGRTGRAGKKGIAISLVEAHDNVLL
GKVTRYIKEPLKSRTIDELRPTTRPPSEKLNGKPSKKVLAKRKELKQTEAKEAQPRAKER
HRDTKNIGKRRKPTAVAKPDSAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccactttttccgaactcgaactagatgaaagcctgctgaaagcattgcag
gagaagggctatacacgccctacggctatccaggccgctgcgatcccgcctgcactggag
ggtcgtgacgttctgggttcggcaccaaccggtacaggcaaaacggcggcttatctgctg
cccgtgcttcagcatttgctcgacttcccccgtaaaaaatccggaccgccgcgcgttctg
atcttaacgccgacgcgcgaactggcgatgcaggttgccgatcaggcccgtgagcttgct
aaatacacccatctggatatcgcgacgataaccggtggcgttgcgtacatgaaccacgcg
gaagtgttcagcgaaaaccaggacgtcgtggtcgccaccaccggccgtctgttgcagtac
atcaaagaagagaactttgactgccgcgcggtagaatcgctgatcctcgatgaagcggac
cgcatgctggacatgggctttgcccaggatatcgaaaccatcgcggctgaaacccgctgg
cgcaaacagacattactgttctccgccacgctggaaggcgatgcgattaaagacttctct
gaacgtctgctgaacgagccggaagaaattgaagccgatccggcccgccgcgaacgtaaa
aaaattctgcagtggtactatcgcgcagatgacgttaagcataaaaccgcgctgttgatc
cacatgctgaaacagcctgaagtcacccgctccgtggtgtttgtgcgtaaacgtgagcgt
gtgcacgagctgtgtggctggctgcgtgaagcgggcattaacaccagctatctggaaggc
gaactggagcagttcaagcgtaacgaagcgattaaacgtgtggtggatggccgtgtaaac
gtgctggttgcaaccgatgttgccgcgcgcggtatcgacattgaagatgtcagccacgtg
ttcaacttcgatatgccacgcacctccgacacctacctgcaccgtattggtcgtactggc
cgcgcgggtaagaaaggcatcgcgatttcgctggttgaagcacacgacaacgtgttgttg
ggtaaagtgactcgctacatcaaggagccgctgaaatcccgcaccattgacgaactacgt
ccaaccactcgtccgccgagtgagaagctgaacggcaagccgtcgaagaaagtgctggcc
aagcgcaaagagcttaaacagacggaagcgaaagaagcgcagccgcgtgcgaaagagcgc
catcgcgatacaaagaacattggtaagcgtcgtaagcctaccgcagtggcgaaaccggac
agtgctgaataa
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