Erwinia billingiae: EbC_35760
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Entry
EbC_35760 CDS
T01270
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ebi
Erwinia billingiae
Pathway
ebi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EbC_35760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_35760 (recD)
Enzymes [BR:
ebi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EbC_35760 (recD)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EbC_35760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
T2SSE
nSTAND3
UvrD_C
PhoH
AAA_28
DEAD
AAA_33
AAA_16
SRP54
ABC_tran
AAA
ATPase
MukB
TrwB_AAD_bind
CbiA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAX61107
UniProt:
D8MWA0
LinkDB
All DBs
Position
complement(3977651..3979465)
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AA seq
604 aa
AA seq
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MQQAGELRLFRSLDIQFARMIASEDHPALMLAAACVSAEAGEGHVCLPLAQFTEQALFDG
RQPELARQLWRAAGEPAWLDLLQNAEAVGDGSTATPLVLHQQRLYLHRMWQSEGEVARFI
GREAAATAFDPQQLRAALDRQFGQQPDDWQKIAAAVAITRQISVISGGPGTGKTTTVAKL
LATLLSLSQETVRIRLAAPTGKAAARLTESLGKALQRLEVSNEEKQRFPAEATTLHRLLG
AVPGSQRMRYHAGNPLHLDLLVVDEASMVDLPMMANLIAALPSQARVIFLGDRDQLASVE
AGAVLGDICRCAETGYSLARAEELSALTGCLIEGREDPQAPPVRDSICLLRKSYRFDASS
GIGQLALAVNAGDTRQVDAVFAADYADIERFTLGSSEAYQHLLTACVAGYRDYLSRLAAG
AQPADVLDAFSRFQLLCALREGPFGVMGLNERIEVSLQKAGLIRRSPGAANKWYPGRPVM
IARNDSALGLFNGDIGIAMLDEEQALKVFFPLPDGSIKAVQPSRLPPHDTAYAMTVHKSQ
GSEFDHTVLVLPNQFTPVLTRELVYTAITRAKLRLTLYAEQNVLNSAVKMRTLRRSGLVE
RLTE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaggccggtgaactgcggctgttccgctcgctggatatacagtttgcccgcatg
attgcgtctgaagatcatcctgctttaatgctggccgcggcctgcgtcagcgcggaagcc
ggagaagggcatgtttgcctgcctttggcccagtttaccgaacaggcgttgtttgacggg
cgacagcctgaacttgcccgtcagctgtggcgggcagcgggtgaaccagcgtggctggac
ctgttgcaaaacgctgaggccgtcggtgacggttccacggccacaccgctggttttgcat
cagcagcgtctttacctgcaccgcatgtggcagtctgaaggagaggtggcgcgatttatt
gggcgggaagccgctgcaaccgcattcgacccgcagcagctgcgcgcagcactggatcgg
cagtttggtcagcagccggatgactggcaaaagattgcggctgcggtcgcgatcacccgt
cagatctcggtgatttccggcggaccaggcaccggtaaaaccaccaccgtggccaaactg
ctggccaccttgctctcgctgtcgcaagagacggtacgtatccgtctggccgcgccaacc
ggtaaagccgcggcccgattgaccgaatcgctgggcaaagctctgcagcggctggaggtc
agtaacgaggagaaacagcggttcccggctgaggcgaccacgctgcaccgcctgctcggt
gcggtgcccggcagtcagagaatgcgttatcacgccggtaacccattgcacctcgatctg
ctggtggtggatgaagcgtcgatggtcgatctgccgatgatggctaacctgattgccgcg
ttaccttcgcaggcgcgggtgatcttcctcggtgaccgcgatcagctggcctcggttgaa
gcgggcgcggtattgggcgatatctgccgctgcgctgaaacgggatacagtcttgcacgt
gcagaagagctgagtgccttaacgggctgccttatcgaaggccgggaagacccgcaggcg
ccgccggtgcgtgacagtatttgcctgctgcgcaagagctaccgcttcgatgcctcttca
ggaattggtcagctggcgctggccgtcaatgcgggcgatacgcgccaggtcgatgcagtc
tttgccgctgattacgccgatattgagcgcttcacgttggggagtagcgaagcgtatcag
catctgcttactgcctgtgttgccggataccgcgactatctgagccgccttgcagccggt
gcacagcctgccgatgtgctggatgcgtttagccgtttccagctgctttgcgcgctgcgc
gaagggccgtttggggtgatggggctgaatgaacgcattgaggtctcgctgcaaaaagcg
ggcttgatccgtcgttcaccgggcgcggcgaataaatggtatcccggccggccggtgatg
attgcccgcaacgacagtgcgttggggctgtttaacggcgacattggtattgcgatgctg
gatgaggaacaggcgctgaaggtgttcttcccactgcctgacggcagcatcaaagccgta
cagcccagccgactgccgccgcacgatactgcctatgcgatgacggtgcataaatcgcag
ggatccgaattcgatcacaccgtgctggtgctgcctaatcagttcacgccggtgctgacc
cgcgagctggtttacaccgccatcacccgcgcgaaattacgattaacgctgtatgcggag
caaaacgtgttaaacagcgcggtgaaaatgcgcaccttgaggcgcagcgggctggtcgaa
cggcttaccgaataa
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