Erwinia billingiae: EbC_39980
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Entry
EbC_39980 CDS
T01270
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ebi
Erwinia billingiae
Pathway
ebi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EbC_39980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebi03019
]
EbC_39980 (pnp)
03016 Transfer RNA biogenesis [BR:
ebi03016
]
EbC_39980 (pnp)
Enzymes [BR:
ebi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EbC_39980 (pnp)
Messenger RNA biogenesis [BR:
ebi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EbC_39980 (pnp)
Transfer RNA biogenesis [BR:
ebi03016
]
Prokaryotic type
tRNA degradation factors
EbC_39980 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
UPF0181
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAX61529
UniProt:
D8MXH2
LinkDB
All DBs
Position
complement(4464506..4466650)
Genome browser
AA seq
714 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGKKTTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFINEVQIIATVVSV
NPQVHPDIVALIGASAALSLSGLPFNGPIGAARVGYLNDQYVLNPTTDELKESKLDLVVA
GTQGAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIDQINALVAEAGKPRWDWKPEAVNE
SLQTRIAALAESRLSEAYQITEKQERYAQVGVIKSETTAALLAEDASLDDNEIGDLLHAL
EKNVVRSRILSGAPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKADA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQAAEPEAAVTPAAPEAPEAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgtaaaaaaattccagtatggtcagcataccgtcaccattgagacc
ggtatgatggctcgccaggcaacggcagccgtaatggtaagcatggacgacaccgctgtg
ttcgttaccgttgtaggcaaaaagaccactaagccaggccaggacttcttcccgctgacc
gttaactatcaggagcgtacttatgctgctggtcgtattccgggtagcttcttccgtcgc
gaaggccgtccaagcgaaggtgaaaccctcatctctcgtctgattgaccgtccggttcgt
ccgctgttcccggaagggttcatcaacgaagtccagattattgccaccgtggtctccgta
aacccacaggttcacccggatatcgtggcattaatcggtgcctctgccgcactgagcctg
tcaggtctgcctttcaatggtccaattggtgccgctcgcgtgggctaccttaacgatcag
tacgtgctgaacccaacgaccgatgagctgaaagaaagtaagctggatctggttgtagcg
ggtactcagggcgcggttctgatggttgagtctgaagctgaactgctgagcgaagatcag
atgctgggcgcagtggtgttcggccacgagcagcagcaggttgtgatcgaccaaatcaac
gcgctggttgccgaagcaggtaaaccgcgttgggactggaagccagaagctgtcaacgaa
tcattacagacccgtattgctgcgctggctgaatctcgcctgagcgaagcttaccagatc
actgaaaaacaagagcgttatgctcaggttggcgtgatcaagtctgaaactaccgcagca
ctgctggcggaagacgctagccttgatgacaacgaaatcggcgatctcctgcatgcgctt
gagaaaaacgtggttcgtagtcgtatcctgagcggcgctccgcgtatcgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgcactggcgttctgccacgtactcacggttcc
gcgctgttcacccgtggtgaaactcaggcactggttaccgcaacgctgggcaccgcccgt
gatgcgcagaacctggatgagctgatgggtgagaagaccgacagcttcctgttccactac
aacttccctccgtactgcgtaggtgaaactggcatggttgggtcgcctaagcgtcgtgag
attggtcacggtcgtctggctaagcgtggcgtactggcagtaatgcctaaagctgacgcg
ttcccttataccgtgcgtgtggtgtcagaaatcactgaatcaaacggctcttcttcaatg
gcttccgtctgtggtgcttcactggcactgatggacgcaggcgtaccaatcaaagcagcc
gtagccggtattgcgatgggtctggtaaaagaaggcgagaactttgtggttctgtctgac
atcctgggtgacgaagatcatctgggcgacatggacttcaaagtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcacattctgggcgtgatggaacaggct
atcagcacgccgcgtggcgacatctctcagttcgcaccacgtattcacacgattaaaatc
agcccggacaagatcaaagacgtgatcgggaaaggcggttctgtgattcgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgatggcacggtgaaaatcgcagcgacc
gacggtgagaaagcgaaatatgctatccgtcgtatcgaagagatcactgcagaaatcgaa
gtgggccgtatctacaacggtaaggttacccgcatcgttgacttcggtgccttcgttgct
atcggtggtggcaaagaaggtctggttcacatctctcagatcgctgataagcgtgtagag
aaagtgaccgactatctgcagatgggccaggaagtgccggtgaaagttctggaagttgat
cgccagggccgcgtacgtctgagcatcaaagaagcgactgagcaggctgcagagcctgaa
gcagccgtgactccagcagcgcctgaagctcctgaagcagaataa
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