Erythrobacteraceae bacterium WH01K: PF049_01035
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Entry
PF049_01035 CDS
T10954
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ebk Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PF049_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebk03019
]
PF049_01035
03009 Ribosome biogenesis [BR:
ebk03009
]
PF049_01035
04131 Membrane trafficking [BR:
ebk04131
]
PF049_01035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ebk04147
]
PF049_01035
Messenger RNA biogenesis [BR:
ebk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PF049_01035
Ribosome biogenesis [BR:
ebk03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PF049_01035
Membrane trafficking [BR:
ebk04131
]
SNARE
SNARE associated proteins
Others
PF049_01035
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PF049_01035
Exosome [BR:
ebk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PF049_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_33
CDC48_2
TIP49
AAA_14
IstB_IS21
RNA_helicase
AAA_7
nSTAND3
NPHP3_N
NACHT
AAA_3
AAA_28
AAA_18
AAA_17
ABC_tran
DUF815
Mg_chelatase
AAA_lid_PRS2_C
Sigma54_activat
AAA_30
AAA_11
Parvo_NS1
AAA_24
AAA_19
TsaE
Zeta_toxin
NB-ARC
PhoH
Bac_DnaA
Sigma54_activ_2
SLFN-g3_helicase
ATPase
ATP-synt_ab
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WBY16784
LinkDB
All DBs
Position
complement(204844..207171)
Genome browser
AA seq
775 aa
AA seq
DB search
MADADTAVEQKQVRLQVAAARQEESGQGIARMPRSAFQALGITEGDVVEIEGKRPTVAIA
MPAYDEDQSLEVVRLDGLQRGNAEAGSGEHVVIRAAESKPATRVVFAPASREMRLQGPTQ
ALKRNFFRKPVLAGDLVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLSVHSTTPKGIVH
IDENTEVELRAEFEAPRDARAVVNYDDVGGIDDTIQQLREMVELPLRYPELFTRLGVDPP
KGVLLHGPPGTGKTRLAQAVANESDADFSIINGPEIMGSGYGESEKRLREVFEQAAQNAP
AIVFIDEIDSIAPKRSQVSGEAEKRLVAQLLTLMDGLEARVNVVVIAATNRPDAIDEALR
RPGRFDREIVIGVPDESGRREILGIHTRGMPLGDRVDLKELSRMTYGFVGADIAALAREA
AIDAVRRIMPRIDLDERTIPPEVLEDLCVTREDFLSALKRIQPSAMREVMVQVPQVGWDD
IGGVDESIEKLKEGIELPLKNQEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAKEAEAN
FISMKSSDLLSKWYGESEQQIAKMFQRARAVAPCVVFIDEIDSLVPARGSSGMEPQVTGR
VVNTVLAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPNRKGREQILGI
HTSEMPLAADVDLGEVAAKTDRFTGADLEDVVRRAGLNALHREGTEVTEVSAADFTEALE
DSRATVTSKMEAEYKKMRGELKKRAAEAMPIGFVHEGMVESTRAKKHGDTTDQAG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggatacggcagtcgaacagaagcaggtgagactgcaggtggcagcggcc
aggcaggaggaatcggggcagggcatcgcccgcatgccgcgttccgcattccaggccctg
ggcatcaccgaaggcgacgtcgtcgagatcgagggcaagcgtcctaccgtcgcaatcgcc
atgcccgcctatgacgaggatcagtcgctggaagtggtccggctcgatggcctccagcgc
ggcaatgccgaggccggctcgggcgagcatgttgtcattcgtgctgccgaatcgaagcct
gcgacccgcgtcgttttcgcgcccgccagccgcgaaatgcgcctgcagggcccgactcag
gcgctgaagcgcaatttcttccgcaagccggtactggcgggcgatctcgtcgcgacaacc
gggcagcagccggtccagaacatgccgcccgaagtgcgccgcatgttcaacgcgccggcc
tatgcgctgacccagatccgcctgtccgtccattccactacgcccaagggtatcgtccat
atcgacgagaataccgaggtcgagctgcgtgccgagttcgaggcgccgcgcgatgcgcgt
gctgtcgtgaattacgacgatgtcggcggcattgatgatacgatccagcaattgcgcgaa
atggtcgaactgccgctgcgctatcccgagctgttcacccgcctcggtgtcgatccgccc
aagggcgtgttgctgcatggcccgcccggaaccggcaagacgcggctggcgcaggccgtt
gccaatgaaagcgatgccgatttctctatcatcaacggcccggaaatcatggggtcgggc
tatggcgagagcgagaagcgcctgcgcgaagtgttcgaacaggcggcgcagaacgcgccg
gcgatcgtcttcatcgacgaaatcgactccatcgcgcccaagcgcagccaggtcagcggc
gaggcagaaaaacgcctggtcgcacagctcctgaccctgatggacggcttggaagcgcgc
gtcaacgtagtggtgatcgccgctaccaatcgccccgatgccatcgacgaggccttgcgc
cgaccgggccgcttcgaccgggaaatcgttatcggtgtgcccgacgaaagcggccgccgc
gaaatcctcggcatccacacgcgcggcatgccgctcggcgacagggtcgatctgaaggaa
ttgtcgcggatgacctacggcttcgtcggcgcggatattgccgcgctggcccgtgaggcg
gcgatcgacgccgtgcgccggatcatgccgcgcatcgatctcgacgagcggaccatcccg
ccggaggttctcgaggacctgtgcgtgacccgcgaggatttcctctccgccctcaagcgt
attcagcccagcgccatgcgcgaggtgatggtccaggtgccgcaggtcggctgggacgat
atcggcggcgtggacgagtcgatcgagaagctgaaagaaggcatcgagcttccgctgaag
aaccaggaggcgttccgcaggctcggtatccgtccggccaagggtttcctcctctacggc
ccgcccggcaccggcaagaccctgctggcgaaggcggtcgcgaaggaggcggaggcgaac
ttcatctcgatgaagagctccgacctgctgtccaaatggtatggcgagagcgagcagcag
atcgccaagatgttccagcgcgcccgcgccgtcgctccgtgcgtcgtcttcatcgacgag
atcgacagcctcgtgcctgcccgcggttcgtccgggatggagccgcaggtgacgggccgc
gtggtcaatacggtgctggcggagatggacggtctggaggaattgcagtccgtcgtcgta
atcggtgcgaccaaccggcccacgctggtcgatcccgcgctgctgcggccgggccggttt
gacgaactggtctatgtcggcacgccgaaccgaaaggggcgcgagcagatcctgggcatt
catacctcggaaatgcccctggcagcggatgtcgacctcggcgaagtggccgcgaagacg
gaccgcttcaccggcgccgacctcgaagacgtggtccgccgcgccggcctcaacgcgctg
caccgggaaggtacggaggtgaccgaagtctccgccgccgacttcaccgaggcgctggag
gacagccgtgcaaccgtgacctccaagatggaggcggaatacaagaaaatgcgcggcgag
ctgaagaagcgggcggcggaagccatgccgatcggcttcgtgcatgagggcatggtcgaa
agcacccgtgcgaagaagcacggggatacgaccgaccaggccggctag
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