KEGG   Erythrobacteraceae bacterium WH01K: PF049_01560
Entry
PF049_01560       CDS       T10954                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ebk  Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:ebk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebk03400]
    PF049_01560
Enzymes [BR:ebk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PF049_01560
    5.6.2.6  RNA 3'-5' helicase
     PF049_01560
DNA repair and recombination proteins [BR:ebk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PF049_01560
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WBY16881
LinkDB
Position
complement(301060..303525)
AA seq 821 aa
MTVPPEITAWFAGQDWRVRRHQSEMLGASDAGRHALLVADTGAGKTLAGFLPTLAAFTPS
RLGDAPQPEGLHTLYVSPLKALAHDVQRNLVRPVEEMGLPIKVETRSGDTPSDRKRRQRD
KPPHVLLTTPESLSLLLSYPEAETLFAGLKRIVIDEVHAFATGKRGDLLALALTRLQAIA
PDMQRAALSATVANPERYREWLAPWGDIDSVALVAGEDGAPADVEILLPDEERVPWGGHA
ATWAIPQLYDLIRGNRTTLVFTNTRFLSEYIFQHLWDVNEDKLPIGIHHGSLSKEARRKV
EGAMARGELRALVATASLDLGVDWGDIDCVVQMGAPKGSSRLLQRIGRANHRLDLRSRAI
LVPGNRFEFLEATAAKEAVDAGQRDGEDFRPGGLDVLAQHVMGTACAGPFEEAALLAEVR
SSLAYAWIDEEIWDRVLTFVATGGYALKAYDKFRRIVREKGAGGESAVWRLTHPEQAARH
RLNAGIIMDGEMLDVRFRNGRSLGRVEERFAAQLSPGDTFAFAGTSLEVEQLRDMEVVVR
ASAKAAMIPSYGGARMPLTTHLADRVRAMLVDRAGWARFPDDVREWLEVQDWRSEMPGPD
NLLVESFPHAKRHYTVYYTFTGWNANQSLGMLITKRMEDRGLMPGGFVANDYSLAVWGLK
PVADPAPLLSPDILAHEFVDWVQDSHLLRRSFREVAVIGGLVERQHPGRRKSGKQVTFST
DLIYDVLRKYEPEHVLLEAAWADARERMTDVGRLGDLLGTAAERLVHVELDRVSPLAVPV
MVMIGREATPQGAVDDELLLEAESLAGQAMRVDGSEELGEA
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgaccgttcctcccgaaatcaccgcctggtttgccgggcaggactggcgcgtgcgccgg
catcagtcggaaatgctgggggccagcgatgcgggtcgccacgccctgctggtcgcagat
accggcgcgggtaagacgctggcaggattcctgcccacccttgccgccttcaccccctct
cgcctcggcgatgcgccgcagcccgaggggctgcatacgctctacgtctcgccgctgaag
gcgctggcgcacgatgtgcagcgcaatctcgtccgcccggtcgaggaaatgggcctgccc
atcaaggtcgagacacgcagcggcgataccccgtccgatcgcaagcggcggcagcgggac
aagcccccgcatgtcctgctgacgacaccggaatcgctgtccctcctgctcagctatccg
gaggcggagacgctttttgccgggctgaagcgcatcgtgatcgacgaggtgcacgccttt
gccaccggcaagcgcggtgatctgctcgcgcttgctttgacgcggttgcaggccattgca
cccgacatgcagcgcgcggcactgtcggccacggtcgccaatccggaaagataccgtgaa
tggctggccccgtggggcgacatcgacagcgtcgcgctggtagcgggggaggacggcgcg
ccggccgacgtcgagatcttgctgccggacgaggagcgtgtgccatggggcggccacgcg
gcgacctgggcgattccgcagctctatgacctcatccgtggcaatcgcacgacgctggtc
ttcaccaatacgcggttcctgtccgaatatatcttccagcacctgtgggatgtgaacgag
gacaagctgccgatcggcatccatcacgggtcgctgagcaaggaagcgcggcgcaaggtc
gaaggcgccatggcgcgcggcgaactgagggcgctggtggcgaccgccagtcttgatctg
ggcgtggactggggcgatatcgattgcgtggtgcagatgggcgctcccaagggctccagc
aggctgctgcagaggatcggccgggccaatcaccggctcgatctgcgaagccgggcgata
ctggttccgggcaacaggttcgaattcctggaggcaaccgcggcgaaggaagcggtcgac
gccgggcagcgcgacggcgaggattttcgcccgggtggactcgacgttcttgcccagcac
gtgatgggaaccgcctgcgccgggccgttcgaggaagctgccttgctggcggaggtacgg
tccagcctcgcctatgcatggatcgacgaagaaatctgggaccgtgtgctgaccttcgtt
gcgaccggcggatatgcgctcaaggcctatgacaagttccggcgcatcgtgcgggagaag
ggcgcgggcggagagagtgcggtctggcggctgacccatcccgagcaggcggcgcgccac
cggctgaatgccgggatcatcatggacggcgagatgctggacgtgcgtttccgcaacggc
cgctcgctgggccgggtcgaggaacgcttcgccgcccagctatcgccgggcgacaccttc
gcctttgcagggacgtcgctggaggtcgaacagctgcgcgacatggaagtggtggtgcgg
gcctctgccaaggcggcgatgatcccgtcctatggcggggcgcgcatgccgctgaccacg
catctggccgacagggtgcgagccatgctggtcgatcgggccgggtgggcacgctttccc
gacgatgtccgggaatggctggaagtgcaggactggcggagcgaaatgccggggccggac
aacctgctggtcgaaagcttcccccatgcgaagcggcattacacggtctattataccttt
accgggtggaacgcgaaccagtcgctcgggatgttgattaccaagcggatggaggatcgt
gggctgatgcccggcgggttcgtggcgaacgattactcgctggccgtctggggcctgaaa
ccggtggccgatccggcgccgctcctttccccggacatccttgcgcatgaattcgtggac
tgggtgcaggacagccatctgctgcgccgttccttccgcgaggtggcggtgatcggcgga
ctggtggagcgacagcatccgggcaggcgcaagagcggcaagcaggtcaccttcagcacc
gacctgatctacgatgtgctgcgaaaatacgaacccgagcacgtcctcctggaagcggca
tgggccgatgcgcgggaaaggatgacggatgtggggcggcttggcgacctgctcggcacc
gcggcggagcggctggtccatgtcgaactcgaccgggtaagcccgcttgccgtgcccgtc
atggtgatgatcgggcgcgaggcgacaccgcagggggcggtggacgacgagctgctgctg
gaggcggagagcctggcgggacaggccatgcgggtcgatggttccgaagagcttggcgag
gcttag

DBGET integrated database retrieval system