Erythrobacteraceae bacterium WH01K: PF049_01850
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Entry
PF049_01850 CDS
T10954
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Pathway
ebk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF049_01850 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebk03400
]
PF049_01850 (xth)
Enzymes [BR:
ebk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PF049_01850 (xth)
DNA repair and recombination proteins [BR:
ebk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PF049_01850 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
CG7065_mid
Motif
Other DBs
NCBI-ProteinID:
WBY16936
LinkDB
All DBs
Position
353978..354769
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AA seq
263 aa
AA seq
DB search
MRIATFNINGIKARLPRLLEWLEETRPAVACLQEIKSQDDGFPAEEFEKIGYKAIWHGQK
SFNGVAILADGTAPEETMRGLPPLTEGEEPDEQSRYLEADVAGVRICNLYLPNGNPQPGP
KFDYKLHWMKRLRARMQELWRQELPTIVLGDFNVIPEAKDTFSVRAMADDALTQPESRDA
YNHLLADGWTDALGTLNPRGGVWTYWDYQRGAWQRDHGFRIDHCLLSPELADRLLSAGVD
KEYRGREKASDHAPVWVELAPQD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattgcgacattcaacatcaacggcatcaaggcccgtcttccccgcctgctcgaa
tggctggaggaaacccgccctgccgtcgcctgcctccaggaaatcaagtctcaggacgat
ggcttcccggcggaagaattcgagaagatcggctacaaggcgatctggcacggccagaaa
agcttcaacggcgtcgcgatcctggcggacgggactgcgcccgaagaaaccatgcggggc
ctgccaccgctgacggaaggcgaggaaccggacgaacagtcgcgctatctcgaagcggat
gtcgccggggtgcgcatttgcaatctctacctgcccaacgggaatccgcagccgggcccc
aaattcgattacaagctgcactggatgaagcgcctgcgcgcccggatgcaggaattgtgg
cgacaggaattgcccaccatcgtgctgggcgattttaacgtcataccggaggcgaaagac
acgttttcggtgcgcgccatggcggacgatgcgttgacccagccggaatcgcgcgatgcc
tataaccacctgctcgccgatggctggacggacgcgctgggaacactgaaccctcgcgga
ggcgtctggacctactgggattaccagcgcggggcatggcagcgcgatcacgggttccgg
atcgaccactgcctgttgtcgcccgaacttgccgaccggctgctttcggccggcgtcgac
aaggaatatcgaggccgcgaaaaggcaagcgaccacgcccctgtctgggtagagctcgcg
ccgcaggactag
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