Erythrobacteraceae bacterium WH01K: PF049_01880
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Entry
PF049_01880 CDS
T10954
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Pathway
ebk03030
DNA replication
ebk03430
Mismatch repair
ebk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF049_01880 (dnaQ)
03430 Mismatch repair
PF049_01880 (dnaQ)
03440 Homologous recombination
PF049_01880 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebk03032
]
PF049_01880 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ebk03400
]
PF049_01880 (dnaQ)
Enzymes [BR:
ebk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PF049_01880 (dnaQ)
DNA replication proteins [BR:
ebk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PF049_01880 (dnaQ)
DNA repair and recombination proteins [BR:
ebk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PF049_01880 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WBY16942
LinkDB
All DBs
Position
complement(357748..358437)
Genome browser
AA seq
229 aa
AA seq
DB search
MREIVFDTETTGLDPKKGDRMVEIGCVEMVNRVETGASFHAYYNPERDMPAEAEAVHGLS
IQFLSDKPLFADGAAELLEFIGDAPLVAHNASFDFGFLNAELEQCGLAPVSMDRMVDTVT
MARRKFPGAKVSLDALCTRFGVDRSHRVKHGALLDAELLAQVYVELTGGRQIGLELAAEA
ASDEAEMAQAQIVRPRREPRPARRHEASEEELARHRAFIAKIQKPLWTH
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaattgtcttcgatacggaaaccaccggcctcgaccccaagaagggggaccgg
atggttgaaatcggctgcgtggagatggtcaaccgggtcgagaccggggccagtttccat
gcctattacaaccccgaacgcgacatgccggcagaggcggaggcggttcacggcctgtcg
atccagttcctgtcggacaagcccctgtttgccgacggcgcggcagagcttctggaattc
atcggcgatgcgccgctggtcgcgcataacgcctcgttcgatttcggtttcctcaatgcc
gagctggaacaatgcgggctggcgcccgtcagcatggaccgcatggtcgacacggtgaca
atggcccggcgcaagtttcccggcgcaaaggtttcgcttgatgcgctgtgcacccgcttc
ggcgtcgaccgcagccaccgcgtcaaacatggcgcgctgctggatgcggaactcctggcg
caggtctatgtcgaactgacgggcggccgccagatcggcctggaactggcagcagaggcg
gcatcagacgaagcggagatggcgcaggcgcagatcgtgcggcccaggcgcgaaccgcgt
ccggcccgccggcacgaggccagcgaggaagaacttgcccgccaccgcgccttcatcgcc
aagatccagaaaccgctctggacgcattga
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