Erythrobacteraceae bacterium WH01K: PF049_06865
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Entry
PF049_06865 CDS
T10954
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ebk Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebk03032
]
PF049_06865
03036 Chromosome and associated proteins [BR:
ebk03036
]
PF049_06865
03400 DNA repair and recombination proteins [BR:
ebk03400
]
PF049_06865
DNA replication proteins [BR:
ebk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PF049_06865
Chromosome and associated proteins [BR:
ebk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PF049_06865
DNA repair and recombination proteins [BR:
ebk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PF049_06865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WBY15347
LinkDB
All DBs
Position
1382734..1383006
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNELIGAVADASGLSKNDAASAVEGVFDAITKTLSKGDEVRLVGFGTFSVARRKASTG
RNPRTGEPMTIKASNQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgaacttatcggtgcggttgccgacgccagcggcctttccaagaacgac
gcagccagcgccgtggaaggtgtcttcgatgcgatcaccaagacgctttcgaagggcgac
gaagttcgtctggtgggcttcggcacgttctccgtcgcccgccgcaaggcttcgacgggc
cgtaacccgcgcaccggcgagccgatgacgatcaaggcatcgaaccagccgaagttcaag
gctggcaagggcctgaaggacgccgtcaactaa
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