Erythrobacteraceae bacterium WH01K: PF049_07840
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Entry
PF049_07840 CDS
T10954
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebk03032
]
PF049_07840 (topA)
03400 DNA repair and recombination proteins [BR:
ebk03400
]
PF049_07840 (topA)
Enzymes [BR:
ebk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PF049_07840 (topA)
DNA replication proteins [BR:
ebk03032
]
Prokaryotic type
DNA Topoisomerases
PF049_07840 (topA)
DNA repair and recombination proteins [BR:
ebk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PF049_07840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WBY15530
LinkDB
All DBs
Position
1580031..1582628
Genome browser
AA seq
865 aa
AA seq
DB search
MQLVIVESPAKAKTIESYLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQK
RFKEISDAAKNADRLVLATDPDREGEAISWHVQELLKKRKALPTKVDRVTFNAITKKAVT
EAMARPRELDTDLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLVCERE
HEIEIFRPDEYWSVLAKMEQDGTAFDARLVKFEGKKLDKLTLGNEGSAMAAKTAVEQGRF
TVEDIETKPLKRNPSPPFTTSTLQQEAARKLGFSASHTMRCAQSLYEAGAITYMRTDGVQ
MDMSAIMAARDAIAERFSEDYRPEKPRFYSTKAKNAQEAHEAIRPTSFLKKSAGSGDEAK
LYDLIFKRAMASQMSAAQLERTTVTMRDATGQHELRATGQVVKFPGFFAVYQEGFDDKSD
DDDQEGLLPAMRKGDTPAKTAVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQ
TLRDRNYVRMEKNRFFAEESGRLLTAFLERFFPQYVAYDFTAGLEDELDVVSDGREEYKK
LLAKFWADFKPKADEVMEKMPSEVTEVLDSYLSDFLFPPREDGKDPRYCPLCDQEGREGG
ELHLRGGRFGAFVACNNYPECKYTRRFAQPGADGSDPAEDGLMGVHPETGAEIHRKSGRF
GPYVEMEEGEEKKRASIPKDVDDFDLEWAVKMLGLPRIVGQHPESGEDIEAGAWRYGPAV
RHKGTYGKLQNTAEIFEIGMNRAVDLLAQSANRKGGGRGKAEPIKTLGEHPTSGGEMKVM
PGRYGPYVTDGTTNATIPKDVKPEDLEQAQAIELIDARAAKGPPKKKGRKKAPAKKKAAP
KKAAAAKKSPAKKKAPAKKPAAKAD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcatcgtcgaatcgcccgcgaaggcgaaaaccatcgagtcttacctcggc
aaggacttcaaggtcctcgcttcctacggtcatgtccgcgacctgccgcccaaggatggc
agcgtgcggccggacgaggatttcgcgatggactgggaactctatcgcgacaagcagaag
cgcttcaaggaaatcagcgacgcggcgaagaatgccgaccggctggtcctcgcgaccgac
cccgaccgcgagggggaggctatcagctggcacgtccaggagctcctgaagaagcgaaag
gcgttgccgaccaaggtcgaccgcgtcaccttcaacgccatcaccaagaaggcggtgacc
gaggcgatggcgcgcccccgcgagctcgataccgacctgatcgatgcctatctcgcccgc
cgcgcgctcgattacctgttcggcttcacgctgagcccagtgctgtggcgcaagctgccc
ggcgcgaagtcggcgggccgggtgcaatcggtcgcgctgcggctggtgtgcgagcgcgag
cacgagatcgagatcttcaggccggacgaatactggtccgtcctcgccaagatggagcag
gacgggaccgccttcgatgcgcggctggtcaagttcgagggcaagaagctcgacaagctg
acgctcggcaatgagggcagcgccatggctgcgaagaccgcggtggagcagggccgcttc
acggtcgaggatatcgagaccaagccgctcaagcgcaatccctcgccgccgttcaccacc
tctacgctgcaacaggaagcggcgcgcaagctcggcttctcggccagccacacgatgcgc
tgtgcccagtcgctctacgaagcgggtgcgatcacctatatgcggaccgacggcgtgcag
atggacatgtcggccatcatggccgcgcgcgatgctatcgcggagcggttcagcgaggat
tatcgcccggaaaaaccacgcttttacagtacgaaggcgaagaatgctcaggaggcgcac
gaggcgatccgcccgaccagctttctgaagaagagcgcgggatcgggcgacgaggcgaag
ctttacgacctcatcttcaagcgcgcgatggcgagccagatgtcggccgcgcagctggaa
cgcaccaccgtcaccatgcgcgatgcgaccggccagcacgagctgcgcgcgacggggcag
gtcgtgaaattccccggcttcttcgcggtctaccaggaagggttcgacgacaagtcggac
gatgacgaccaggaaggcctgctgcccgccatgcgcaagggcgatacgccggcaaagacg
gcggtcgaggccaaccagcacttcacccagccgccgccgcgtttctccgaagcatctttg
gtcaagcggctggaggaactgggcatcgggcgtccgtcgacctatgccagcaccatccag
accctgcgcgatcgcaattacgtgcggatggagaaaaaccgtttctttgcagaggaatcg
ggccggctccttacagcattcctcgaacgcttcttcccgcaatatgtcgcctacgacttc
accgccgggctggaggacgaactcgacgtcgtgtccgacgggcgcgaggaatacaagaag
ctgctcgccaagttctgggccgacttcaagcccaaggccgacgaggtcatggagaagatg
ccgagcgaggtcaccgaggtgctcgacagctacctctccgacttcctcttccccccgcgc
gaggacggcaaggacccgcgctactgcccgctttgcgaccaggaagggcgcgagggcggc
gaactgcaccttcgcggcgggcgcttcggcgcgttcgtggcgtgcaacaattatcccgaa
tgcaaatacacccgccgcttcgcccagccgggcgcggatggcagcgacccggcggaagac
ggtctgatgggcgtccatccggaaacgggcgcggaaatccaccgcaagtcgggccgcttc
ggcccctatgtcgaaatggaggaaggcgaggaaaagaaacgcgccagcatccccaaggat
gtcgacgatttcgacctcgaatgggcggtcaagatgctcggcctgccgcgcattgtcggc
cagcaccccgaaagcggcgaggatatcgaggcgggcgcatggcgctacggcccggcggtg
cgccacaagggtacgtacggcaagctgcagaacaccgccgaaatcttcgagatcggcatg
aaccgagcggtcgacctgctggcccagtcggccaatcgcaagggcggcgggcgtgggaag
gcggaaccgatcaagacgctgggcgaacacccgaccagcggcggcgagatgaaggtgatg
ccgggccgctacgggccgtatgttaccgacggcacgaccaacgcgacgatcccgaaggat
gtgaagccggaggacctggagcaggcacaggcgatcgaactgatcgacgcccgcgccgcg
aagggcccgccgaagaagaaggggcgcaagaaggctccggcaaagaagaaggcggcgcct
aagaaggcggccgccgcgaaaaagtcccctgccaagaaaaaggcccccgccaaaaaaccg
gcggccaaggcagactga
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