Erythrobacteraceae bacterium WH01K: PF049_12010
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Entry
PF049_12010 CDS
T10954
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebk03016
]
PF049_12010 (truB)
Enzymes [BR:
ebk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PF049_12010 (truB)
Transfer RNA biogenesis [BR:
ebk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PF049_12010 (truB)
Prokaryotic type
PF049_12010 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WBY16302
LinkDB
All DBs
Position
complement(2440123..2441136)
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AA seq
337 aa
AA seq
DB search
MTRAPKPSNRRPASGWIILDKPRGLGSTQAVGAVKRNLREGGHVKTKVGHGGTLDPLAEG
VLPIALGEATKLAGRMLDASKIYEFTIRFGEETSTLDSEGEVVQRSTRRPPRAAIAAVLE
HFTGAIEQVPPAFSAVKIDGKRAYDRARAGEAVEMKTRSVVIHSLTFPGAPEGEEATSAF
ATTAGRPDPYDPAAPLELADDVTLVAHVSKGTYIRSLARDIARALGTVGHVTYLRRTKAG
PFTQEQAISLDRLNEIGKGADLQEYLLPLEAGLDDIPALSLSPDDAQAVRQGRKLSGLPQ
TDGLYLATRDTVPVALVELEGGTLRIVRGFNLSDVAE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgtgccccgaaaccttcgaatcgccgtcctgcctccggctggatcatcctcgac
aagccgcgaggactgggatcgacccaggccgtgggtgcggtgaagcgtaacctgcgcgag
ggcggccatgtgaaaaccaaggtcggtcatggcggcacgctggacccgctggccgaaggc
gtcctgccgatcgcactgggcgaagcgacgaagcttgccgggcggatgctggatgcctcc
aagatatacgaattcaccatccggttcggggaagagaccagcacgctcgacagcgagggc
gaggtggtccagcggtccacacgccgcccgccaagggccgcgatcgctgccgtgctggag
cattttaccggcgcaatcgaacaggtgccgcccgcattctccgccgtgaagatcgacggc
aagcgcgcttatgaccgggcgcgggcgggggaggcggtggagatgaagacgcgttccgtc
gtcatccattcgctcacattccccggcgcgccggagggcgaggaagcgacaagcgccttt
gccaccacggcgggccggcccgacccttacgacccggccgcgccgctggaactggccgac
gacgtgacgctggtggcccatgtcagcaaggggacatatatccgttccctggcacgggat
atcgcacgcgcgcttggaaccgtggggcacgtgacctatctgaggcgaacgaaggccggg
ccgttcacgcaggaacaggcgatttcgctggacagattgaacgaaatcggtaagggcgcg
gaccttcaggaatatctcctgccgttggaggcagggctggacgacatcccggccctttcc
ctctctcccgacgacgcgcaggcggtccgacagggccggaaactttcgggactgccccag
accgacgggctctaccttgcgacacgggacactgttccggtggcgctcgtggaactcgaa
ggtggcacgcttcgcatcgtgcggggtttcaacctatccgatgtcgcagagtaa
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