Erythrobacteraceae bacterium WH01K: PF049_12970
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Entry
PF049_12970 CDS
T10954
Symbol
gcvPA
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPA
KO
K00282
glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:
1.4.4.2
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Pathway
ebk00260
Glycine, serine and threonine metabolism
ebk00630
Glyoxylate and dicarboxylate metabolism
ebk00670
One carbon pool by folate
ebk00785
Lipoic acid metabolism
ebk01100
Metabolic pathways
ebk01110
Biosynthesis of secondary metabolites
ebk01200
Carbon metabolism
Module
ebk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PF049_12970 (gcvPA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PF049_12970 (gcvPA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PF049_12970 (gcvPA)
00670 One carbon pool by folate
PF049_12970 (gcvPA)
Enzymes [BR:
ebk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PF049_12970 (gcvPA)
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GFIT
Motif
Pfam:
GDC-P
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WBY16484
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Position
complement(2629382..2630758)
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AA seq
458 aa
AA seq
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MRYLPLTDADRGEMLDVIGADSIDDLFVDVPEAARLNGPIEGLPLHASEMAVEKHMRRLS
KKNLAASDAAFFCGAGAYKHHVPASVDHIIQRGEFLTAYTPYQPEIAQGTLQMLFEFQTQ
VARLYGCAVANASMYDGSTACWEAVAMAGRVTKRSRAVLSGALHPHYAEVVKTMAKFTGD
TIADAKPSIQAEPDLDGLIARIDDDTSCVVVQYPDILGRITDLTPVAEAAHAKGALLIAV
NTEPVALGAITPPGEMGADIVVGEGQSIGVGLQFGGPYLGLFAVRDPKHVRQMPGRLCGE
TTDAEGKRGFVLTLSTREQHIRREKATSNICTNSGLCALAFTVHMTLLGEKGLRTLAAEN
HRLACVAAERLAKIPGVSVLNTAFFNEFTVTLGRDARTVVRNLAKQDVLAGVSLGRLFPN
VSDLSEGLLVAVTETTTEEDIDILCSALTTELTQGEPA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacctgcccttgaccgacgccgatcgcggcgaaatgctggatgtgatcggtgcg
gacagtatcgacgacctgttcgtcgacgtgcccgaggcggcccggctgaacgggccgatc
gagggactgccgctgcatgccagcgaaatggcggtcgaaaagcatatgcggcggctgtcg
aagaagaaccttgcagcgtccgatgcggcgttcttctgcggggcgggcgcgtacaagcat
cacgtgcccgcatcggtcgatcacatcatccagcgcggcgagttcctgaccgcctatacc
ccctaccagccggaaatcgcgcagggcacgctgcagatgctgttcgagttccagactcag
gtcgcgcggctgtacgggtgcgcggtggcgaatgcatccatgtatgacggctcgaccgcg
tgctgggaagcggtcgcgatggcaggccgcgtgacgaagcgcagccgggccgtgctgtcg
ggcgctctgcatccgcattatgccgaggtcgtgaagaccatggcgaagttcaccggcgac
accatcgccgatgcgaaaccgtccatccaggcagagccggacctcgacggcctgattgcg
cggatcgacgacgacacgtcctgcgtggtggtccaatatcccgacatccttggccgcatc
accgacctgacgccggtcgcggaagccgcgcatgcgaagggcgcgctgctgatcgccgtg
aacaccgaaccggtggcactgggcgcgataacgcctcccggcgaaatgggcgcggatatc
gtcgtgggcgagggacagtccatcggcgtcggcctgcaattcggcggaccgtatctcggc
ctgttcgcggtgcgcgatcccaagcatgtacgtcagatgccggggcgcctgtgcggggaa
acgaccgatgcggagggcaagcgcggtttcgtcctgacgctttccacccgcgagcagcat
atccggcgcgaaaaggcgacgagcaatatctgcaccaatagcgggctctgcgcgctggcc
ttcaccgtccacatgacgctgctgggcgagaagggcctgcgcacgctggcggcggaaaac
caccggctcgcctgcgtggcggcggagcggctggctaagattcccggcgtttccgttctc
aacaccgcgttcttcaacgaatttaccgtcacgctgggccgcgacgcacgcacggtggtg
cgcaaccttgcgaagcaggacgtgctggcgggcgtgtcgctcggacgcctgttccccaat
gtttcggacctgtcggaaggcctgctggtcgccgtgaccgaaacgaccacggaggaggat
atcgacatcctctgctccgcgctcacaaccgaactcacgcagggagagccggcatga
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