KEGG   Erythrobacteraceae bacterium WH01K: PF049_14180
Entry
PF049_14180       CDS       T10954                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ebk  Erythrobacteraceae bacterium WH01K
Brite
KEGG Orthology (KO) [BR:ebk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ebk03032]
    PF049_14180
   03036 Chromosome and associated proteins [BR:ebk03036]
    PF049_14180
   03400 DNA repair and recombination proteins [BR:ebk03400]
    PF049_14180
DNA replication proteins [BR:ebk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PF049_14180
Chromosome and associated proteins [BR:ebk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PF049_14180
DNA repair and recombination proteins [BR:ebk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PF049_14180
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: WBY18023
LinkDB
Position
pWH01K:124974..125243
AA seq 89 aa
MNMGDLVKTVAKETDVSEGKAKDIAISIFNAIGDAAAKGEDVAIPQFGKFTVKDRPAREG
RNPSTGEKMQIKASRAVSFKAAKGLKDKM
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaatatgggcgacttggttaagaccgtggcgaaagaaaccgatgtctcggagggcaag
gcgaaggacatcgcaatcagcatcttcaacgcgatcggagatgccgctgcgaaaggggag
gacgtagcgatcccccaattcggaaagttcacggtaaaggatcgccccgcgcgcgaagga
cgtaatccctcgaccggtgagaagatgcagatcaaggcgtctcgggccgtgtcgtttaag
gctgcaaagggtctgaaggacaagatgtga

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