Escherichia coli BL21(DE3): ECD_00345
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Entry
ECD_00345 CDS
T00931
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ebl
Escherichia coli BL21(DE3)
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebl03400
]
ECD_00345 (sbcC)
DNA repair and recombination proteins [BR:
ebl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECD_00345 (sbcC)
Archaeal homologous recombinant proteins
ECD_00345 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
ABC_tran
cobW
nSTAND3
RsgA_GTPase
AAA_21
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ACT42244
LinkDB
All DBs
Position
complement(378009..381155)
Genome browser
AA seq
1048 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE
QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK
KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE
DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR
ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ
GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS
LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM
KERIPVQIKVKKINGLGYSKLESTFAVK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgccattaccggcccaacaggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgt
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaggtggagtttgaagtgaaaggtgaagcgtaccgtgcattctggagccagaatcgg
gcgcgtaaccaacccgacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgcc
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacagcgacgttaacc
gggctggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcggaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcactgagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttacttaccgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcagcaggccttgcaacaggcgttagccgaagaagaaaaagcgcaacctcaactg
gcagcgctcagtctggcacaaccggcacgaaatcttcgtccgcactgggaacgcatcgca
gaacacagcgcggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgcgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatacctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctaccgccctggcgcaacatgctgag
caacgcccactgcgtcagcacctggtcgcgctgcatggacagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaatgtcacgcaagaacagacgcaacgtaac
gccgcacttaacgaaatgcgccagcgttataaagaaaagacgcagcaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcatcaaaacgctggaagctcaacgtgcacagtta
caggcgggtcagccttgcccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggagcctggcgttaatcagtctcgattactggcgctggaaaacgaagttaaa
aagctcggtgaagaaggtgcgacgctacgtgggcaactggacgccataacaaagcagctt
cagcgtgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccactggacgatattcaaccg
tggctggatgcacaagatgagcacgaacgccagctgcggttactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcaactacttttaacgacattgacgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacacgtcagcaagaagcgcagagctggcagcaacgc
cagaacgaattaaccgcgctgcaaaaccgtattcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcactgcgaagaaactgtggtattggaaaactggcgg
caggtacatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcc
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctggcacagcatcaacaacaccgacctgacgacgggttggct
ctcactgtgacggtggagcagattcagcaagagttagcgcaaactcaccaaaagttgcgt
gaaaacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgt
cagcaacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgg
ggatatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccag
gggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacggg
cgctatctgttacagcgcaaagccagcgaggcgctggaagtcgaggttgttgatacctgg
caggcagatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgttagt
ctggcgctggcgctggcgctttcggatctggtcagccataaaacacgtattgactcgctg
ttccttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcg
ctggatgccctgaacgccagtggcaaaaccatcggtgtgattagccacgtagaagcgatg
aaagagcgtattccggtgcagatcaaagtgaaaaagatcaacggcctgggctacagcaaa
ctggaaagtacgtttgcagtgaaataa
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integrated database retrieval system
