Escherichia coli BL21(DE3): ECD_02088
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Entry
ECD_02088 CDS
T00931
Symbol
nfo
Name
(GenBank) endonuclease IV with intrinsic 3'-5' exonuclease activity
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ebl
Escherichia coli BL21(DE3)
Pathway
ebl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECD_02088 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebl03400
]
ECD_02088 (nfo)
Enzymes [BR:
ebl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ECD_02088 (nfo)
DNA repair and recombination proteins [BR:
ebl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ECD_02088 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACT43911
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All DBs
Position
2145739..2146596
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AA seq
285 aa
AA seq
DB search
MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH
YTSAQILPHDSYLINLGHPVAEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE
DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSSVDRHHSLGEGNIG
HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacattggagcgcacgttagtgctgctggcggtctggcaaatgccgcaattcgc
gccgccgaaatcgacgcaaccgcgtttgccttgttcaccaaaaaccaacgtcagtggcgt
gccgcaccgctcacgacgcaaaccatcgatgaattcaaagccgcctgtgaaaaatatcac
tacacatcggcgcaaattcttccccacgacagttatctgattaacctcggacatccggtt
gctgaagctctggaaaaatcgcgcgatgcctttatagatgaaatgcagcgttgcgaacag
ctggggctttctttgctcaacttccaccctggcagccatctgatgcagatttcagaagag
gattgccttgcgcgtattgccgaatccatcaacattgcgctggataaaactcaaggtgtc
accgcggtgattgaaaacaccgccggtcagggcagtaacttagggtttaaattcgaacat
ctcgcagcgattatcgacggcgtagaagataaatcccgcgtcggcgtctgcattgatacc
tgccatgctttcgctgccgggtatgatttgcgtactccagccgaatgcgaaaaaacgttc
gctgattttgcccgtattgtcggctttaagtatctgcgcgggatgcaccttaacgatgcg
aaaagtacctttggcagcagcgttgaccgccatcatagcctcggtgaaggcaatatcggt
catgatgcgttccgctggatcatgcaagacgaccgtttcgacggcattccgctgatcctt
gaaaccatcaacccggatatctgggcagaagagatcgcctggctgaaagcgcaacaaact
gaaaaagcggtagcctga
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