Escherichia coli BL21(DE3): ECD_02640
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Entry
ECD_02640 CDS
T00931
Symbol
ygdH
Name
(GenBank) UPF0717 family protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
ebl
Escherichia coli BL21(DE3)
Pathway
ebl00230
Purine metabolism
ebl00240
Pyrimidine metabolism
ebl01100
Metabolic pathways
ebl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
ECD_02640 (ygdH)
00240 Pyrimidine metabolism
ECD_02640 (ygdH)
Enzymes [BR:
ebl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
ECD_02640 (ygdH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
ACT44457
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Position
2758898..2760262
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AA seq
454 aa
AA seq
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MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN
FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL
NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK
RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLD
EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ
MPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK
EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacacatattagcccgcttggctccatggatatgttgtcgcagctggaagtggat
atgcttaaacgcaccgccagcagcgacctctatcaactgtttcgcaactgttcacttgcc
gtactgaactccggtagtttgaccgataacagcaaagaattgctgtctcgttttgaaaat
ttcgatattaacgtcttgcgccgtgaacgcggcgtaaagctggaactgattaatcccccg
gaagaggcttttgtcgatgggcgaattattcgcgctttgcaggccaacttgttcgcggtc
ctgcgtgacattctcttcgtttacgggcaaatccataacaccgttcgttttcccaacctg
aatctcgacaactccgtccacatcactaacctggtcttttccatcttgcgtaacgctcgc
gcgctgcatgtgggtgaagcgccaaatatggtggtctgctggggcggtcactcaattaac
gaaaacgagtatttgtatgcccgtcgcgtcggaaaccagctgggcctgcgtgagctgaat
atctgcaccggctgtggtccgggagcgatggaagcgccgatgaaaggtgctgcggtcgga
cacgcgcagcagcgttacaaagacagtcgttttattggtatgacagagccgtcgattatc
gccgctgaaccgcctaacccgctggtcaacgaattgatcatcatgccagatatcgaaaaa
cgtctggaagcgtttgtccgtatcgctcacggtatcattatcttccctggcggtgtgggt
acggcagaagagttgttgtatttgctgggaattttaatgaacccggccaacaaagatcag
gttttaccattgatcctcaccggcccgaaagagagcgccgactacttccgcgtactggac
gagtttgtcgtacatacgctgggcgaaaacgcgcgccgccattaccgcatcatcattgat
gacgccgctgaagtcgctcgtcagatgaaaaaatcgatgccgctggtgaaagaaaatcgc
cgcgacactggtgacgcttacagctttaactggtcaatgcgcattgcaccagatttgcaa
atgccgtttgagccgtctcacgagaatatggctaatctgaagctttacccggatcaacct
gttgaagtgctggctgccgacctgcgccgtgcgttctccggtattgtggcgggtaacgta
aaagaagtcggtattcgcgccattgaagagtttggtccttacaaaatcaacggcgataaa
gagattatgcgtcgtatggacgacctgctacagggttttgttgcccagcatcgtatgaag
ttgccaggctcagcctacatcccttgctacgaaatctgcacgtaa
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