Escherichia coli BL21(DE3): ECD_03047
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Entry
ECD_03047 CDS
T00931
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ebl
Escherichia coli BL21(DE3)
Pathway
ebl00550
Peptidoglycan biosynthesis
ebl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ECD_03047 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ebl01002
]
ECD_03047 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ebl01011
]
ECD_03047 (dacB)
Enzymes [BR:
ebl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ECD_03047 (dacB)
Peptidases and inhibitors [BR:
ebl01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
ECD_03047 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ebl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ECD_03047 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ACT44851
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All DBs
Position
3197462..3198895
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AA seq
477 aa
AA seq
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MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVGASAPAIDYHSQQMALP
ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV
ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
AQKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE
PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK
IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS
RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS
LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttccagatttatcatcggattgaccagctgtatagcgttcagtgttcaggcc
gcgaatgttgatgagtacgttactcaactccccgctggtgccaaccttgccctgatggtg
caaaaagtcggcgcgtcggcccccgctattgattaccacagtcagcagatggcgctgccc
gccagtacgcagaaagtgattactgcgctggcggcgttgattcaactcggccccgatttt
cgttttaccacgacgcttgaaaccaaaggcaatgtggaaaacggcgtacttaagggtgac
ttagtggcgcgatttggtgccgatccgacgttaaaacgtcaggatattcgcaatatggtc
gcgactttgaaaaaatctggcgtcaaccaaatcgatggcaatgtgttgatagatacctcc
attttcgccagccacgataaagcccccggctggccatggaatgacatgacacaatgcttt
agcgctccgcctgccgccgccatagttgaccgcaactgtttctccgtctcgctctacagt
gcccaaaaacccggtgatatggcctttatacgcgtggcatcttattaccccgttacgatg
ttcagccaggtacgcaccctcccccgtggttctgccgaagcgcaatactgcgaactggat
gtggtgccaggcgacctgaaccgctttacgctgacgggatgcctgccacaacgttctgag
ccgctcccgttggcttttgccgtacaggatggagccagctatgccggggcaattctgaaa
gatgagttaaaacaggcgggtatcacctggagtggaacactgctgcgccagactcaggtt
aacgaacctggaacggtagttgccagtaaacagtcggccccgctgcacgatctgcttaag
attatgctgaaaaagtcagacaacatgatcgccgatacggttttccgcatgataggccat
gcgcgcttcaatgtgcctggaacatggcgggccgggtcggacgccgtgcgtcagatcctg
cgccagcaagccggtgtcgatattggaaacaccattattgccgatggttcagggctttcg
cggcataacctgattgcccccgccaccatgatgcaggtgctgcaatacattgcccaacac
gacaatgaacttaactttatctccatgctgccgctggcgggctatgacggctctttgcag
taccgtgcaggtctgcatcaggcgggcgtggatggcaaagtctcagcgaaaaccggttcg
ttgcagggggtatataacctggcgggattcattaccacagcgagcgggcaacgaatggcg
tttgtgcaatatctttctggctatgcagtagaaccggcggatcagcgtaatcgccgtatt
ccgttagtgcgtttcgaaagccgtttgtataaagatatttaccagaacaattag
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