Escherichia coli BL21(DE3): ECD_03701
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Entry
ECD_03701 CDS
T00931
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebl
Escherichia coli BL21(DE3)
Pathway
ebl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECD_03701 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebl03019
]
ECD_03701 (recQ)
03400 DNA repair and recombination proteins [BR:
ebl03400
]
ECD_03701 (recQ)
Enzymes [BR:
ebl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECD_03701 (recQ)
Messenger RNA biogenesis [BR:
ebl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECD_03701 (recQ)
DNA repair and recombination proteins [BR:
ebl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECD_03701 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACT45494
LinkDB
All DBs
Position
3898725..3900560
Genome browser
AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggggctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagaaattatcgacactgtgctt
tccggccgcgattgcctcgtcgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtttcaccgctgatttccttgatg
aaagatcaggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacg
caaacccgcgagcagcaacttgaagttatgacaggctgtcgcaccgggcaaatccgcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcggttcccgacgctcccgtttatg
gcgctgactgccacagccgatgacaccacgcggcaggatatcgtgcgcctgctggggctg
aacgatccgctgattcaaatcagcagttttgatcgcccgaacattcgctacatgctgatg
gagaaattcaaaccgctcgatcagttgatgcgctacgtgcaggaacaacgcggtaagtcg
gggattatttactgcaacagccgggcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggaattagcgcggcggcctatcatgccgggctggaaaataatattcgcgtcgacgtg
caggaaaaatttcagcgcgatgacctgcaaattgtggtggcgaccgtggcgtttggcatg
ggcatcaacaagcctaacgtccgcttcgtggtccactttgatattccgcgcaatatcgaa
tcctattatcaggaaaccggtcgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggccgatatggcgtggctacgccgttgtctggaagagaagccgcagggg
caattgcaggatatcgagcgccataaactcaatgcgatgggcgcgtttgccgaagcgcaa
acttgccgtcgtctggtgctgctgaactactttggcgaagggcggcaggagccgtgcggg
aactgcgatatctgcctcgatccgccgaaacaatacgatggttcaaccgatgctcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtg
attcgtggcgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
ctcggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtattt
aacgacgcaaccttgattgagatggcggaacagatgccgatcactgccagcgaaatgctc
agcgttaacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctg
attcgtgcgcatgtcgatggcgacgacgaagagtag
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