Entomobacter blattae: JGUZn3_00010
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Entry
JGUZn3_00010 CDS
T07040
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ebla
Entomobacter blattae
Brite
KEGG Orthology (KO) [BR:
ebla00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JGUZn3_00010 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebla03021
]
JGUZn3_00010 (rpoD)
Transcription machinery [BR:
ebla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JGUZn3_00010 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
IZUMO
Motif
Other DBs
NCBI-ProteinID:
QNT77268
UniProt:
A0A7H1NNA8
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Position
complement(369..2327)
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AA seq
652 aa
AA seq
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MAIKSAARSDSTVRDQEADVSILDTQSAAVKRLIAKGKERGYVTFDELNAVLPQDQMSSE
QIEDVMAILSEMGMQVVENDETEEGEAVKPDTEEDVTDEPDEESATETSVGRTDDPVRLY
LREMGTVELLSREGEIAIAKRIEAGRNEMIGGLCESPLTFKALIAWHEKIKAGEILLRDI
IDLEATQSDALEEGGGSVSSGDGFEAESEAESSEDEDMDSSEIEGSESGGLSLSALEEKF
TPEILAHFEEMEALYEKLQALQKKRLEALNKGDTIHEVDEQAYIDLRDSLTRKVEQVSLQ
NSRIEELVYQLKQMFQKLNGHEGKLLRLAESVKISREDFLAHYRNHELDPNWLEEISSLP
SKYWKNFTGSHTTEIDSLRKKIASVAGEVGLPVMEFRRVYATVTRGERDSARAKKEMIEA
NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRS
IADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLSMPLEKVRKVLKIAK
EPISLETPIGDEEDSHLGDFIEDKSAVIPLDAAIQTNLREATTRVLSSLTPREERVLRMR
FGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaaatctgcagcaagatcagattcaacagtgcgcgaccaagaggcggatgtc
agtattctcgatacgcagtcagctgctgtaaaacgtcttattgccaagggaaaagagcgt
ggctatgttacgtttgatgagctgaatgccgttcttcctcaagatcagatgtcgtctgag
cagattgaagatgtgatggcgattctttctgaaatgggtatgcaggttgtcgaaaacgat
gagaccgaagaaggggaagccgttaaacctgacacagaagaagatgttactgatgaaccc
gatgaggaaagtgccactgagaccagtgttggccgaacggatgacccagtacgcctctat
ttgcgtgagatggggactgtggagctcttatctcgtgaaggcgagattgcgattgccaag
cgtattgaggcgggccgaaatgagatgattgggggcttgtgtgaaagccccttgaccttt
aaagctcttattgcctggcatgaaaaaattaaggcaggcgaaattctgctgcgcgatatt
atagatttggaagccacccagtctgatgctttggaagagggcggagggagtgtttcatcc
ggtgatgggtttgaggctgagtctgaggccgaatcctccgaagatgaggatatggattct
tcagaaatcgagggttcagaaagtggtggtctctctctttctgctctcgaagaaaaattt
accccggaaatcttagcccatttcgaggaaatggaagccttgtatgaaaaacttcaggcc
ttacagaaaaaacggcttgaagcccttaataaaggcgataccattcacgaggtggatgag
caggcttatattgacctcagggattcccttacacgtaaggttgagcaggtcagcttacag
aatagccgtattgaagagctcgtctatcagttaaagcagatgttccagaaattgaatggg
catgagggcaagcttttaaggctggcggaaagtgtaaaaatttcccgtgaggatttcttg
gctcattatcgtaatcatgagcttgatcctaactggcttgaggagatttcaagcctaccc
agtaaatattggaaaaactttaccggaagtcatacgaccgaaattgactctctaaggaaa
aaaattgccagtgtagcaggagaagtgggcttgcctgtgatggagttccgtcgtgtttac
gccaccgttacccgtggggagcgtgactcggcgcgggctaaaaaggagatgatagaggcc
aacctgcgcttggtgatttccattgccaaaaaatataccaatcgtggtttgcaatttctg
gatttaattcaggaaggcaatatcgggttgatgaaagcggttgataaatttgaatatcgc
agggggtataaattttcaacctatgctacatggtggattcgtcaggccataacccgctcc
attgccgatcaggcccgcacgattcgtattcccgttcatatgatagaaaccatcaataaa
ctggtaagaacatcgcggcagatgcttcatgaaattggccgagaacctgcgcctgaggag
ttggcagaaaaattgagcatgcctttggaaaaagtccggaaagtgttgaagattgccaaa
gagcccatctcccttgaaacgcctattggggacgaggaagatagccatctgggagatttt
attgaggataaatcggcagtcattccccttgatgctgctattcaaacgaatttgcgtgaa
gcaacaacccgcgtactctcatcgcttacccctagggaagagcgagtattgcggatgcgt
tttggtattggaatgaatactgaccatacccttgaagaagtaggccagcaatttaacgta
acccgtgaacgaatccggcagattgaagccaaggcgttaagaaaacttaaacatcctagc
cgtagccgtaaacttcgttcctttctggatgataactga
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