Entomobacter blattae: JGUZn3_16760
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Entry
JGUZn3_16760 CDS
T07040
Symbol
rnj
Name
(GenBank) Ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ebla
Entomobacter blattae
Pathway
ebla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JGUZn3_16760 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebla03019
]
JGUZn3_16760 (rnj)
Messenger RNA biogenesis [BR:
ebla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JGUZn3_16760 (rnj)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Lactamase_B
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QNT78894
UniProt:
A0A7H1NSY4
LinkDB
All DBs
Position
1899802..1901448
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AA seq
548 aa
AA seq
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MNNQSKGLAFLPLGGTGEIGMNFNLYRMDGQWLIVDCGIGFSGNNTPEADILVPDSSFIE
GYRDDLCGMVITHAHEDHIGAVAHLWKGLGCPIYATPFAAAVLKKKLYEAQLLSKITIHI
IPPGSQFSVGPFDIEFVPVAHSIPESQSLIMRTPYGTIVHTGDWKIDPTPLIGPVTDMER
FKAVGQEGVLALIGDSTNVLTDRDSDSELSVRESLAKIISNLQGRVAVTCFASNVARIES
IAIAAQEANRKVVIVGRSLKNIDGSARECGYLKDIPPFLTEQQVNSLSDHETLMIITGSQ
GEPRSALSRIAADTHQNISLGVGDTVIYSSRMIPGNEQAVIRVQDLLARRGVKIITDRDD
LVHVSGHATRRDMHKLYEAIKPQYIIPVHGEWRHLSSHATLAKEHGAQAILLEDGDLLNL
SPGEVKVIDTAVTGQLAVDGGRLLPIDGDIMSKRRKMLYNGMIIASLAIDDEGYLIGDPK
ISAPGLLTKEDPEAERVTESFAVAIENLPEEIRLDDNLLKEASKTALRRAFGNKLQKRPL
VDVHLLRV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcagagtaaaggtcttgctttccttcccttgggagggacgggcgagatcgga
atgaatttcaacctttaccgtatggacggtcaatggttaatcgtggattgtggtattggg
tttagtggaaataatactccagaagccgatattctcgttcccgattcctcctttattgag
gggtatagggatgatttgtgcggtatggttataacacatgcccatgaagaccatatcggt
gcggttgcccatttatggaagggattaggatgccctatttatgcaaccccttttgcagct
gctgtattaaaaaagaagctatatgaagcccagcttctttctaaaataacaatccatatt
atccctccaggaagtcagttttcggtaggtccttttgatattgaatttgttcccgttgcc
cattctatccccgaatcccagtctcttatcatgcgtacaccttatgggactatcgtccat
acgggggactggaaaatagacccaacccccttgattgggcctgttacagatatggaacgt
ttcaaagcggttggtcaggaaggggtattggccctgattggcgacagcaccaatgtgcta
acggatagagattctgattcagagctgagcgtaagagaaagcctggccaagattatttca
aacttacaggggcgagttgcagtaacttgttttgctagcaatgttgcaaggatagaaagc
attgccatagctgctcaggaagccaacagaaaggttgttattgttggtcgttctctaaaa
aacattgatggttcagcccgtgaatgtggttatttaaaagatataccaccctttttaaca
gaacagcaggtgaattctctgtctgatcatgagaccctcatgatcattacgggaagccaa
ggcgaaccacgttcagcactttcccgaatagcagcagatacccaccagaatatttctctt
ggggtcggggatactgttatctacagtagccgtatgatacctggtaacgaacaggctgtt
atccgtgttcaggatcttctggcacgtcggggagtaaaaattattacggatcgtgatgat
ctcgtgcatgtttctggccatgcgaccagaagggatatgcataagctttacgaagccata
aagccccaatatattattcctgttcatggtgaatggcgccatttaagcagccatgcaacc
cttgccaaagagcatggtgcccaggccattcttctggaggatggtgatcttctcaacctt
tcaccaggggaggtaaaggtaatagatacagctgtaacaggccagcttgcagttgatggg
gggcggctacttcctatcgatggtgatattatgtccaagcgacgcaaaatgttgtataat
ggtatgatcattgcaagcttggctatcgatgatgaaggctacctcattggtgatcctaaa
atcagtgcccctggcttgttgaccaaagaagatcctgaagcagaacgggtaacggaaagt
tttgctgtcgctattgaaaatcttcctgaagaaatacgccttgatgataacctgctcaaa
gaggccagtaaaacggctttgcgtcgcgcctttggtaacaagctgcaaaaaagaccatta
gtggatgtccatctgctgagagtttag
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