Intestinibaculum porci: SG0102_00140
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Entry
SG0102_00140 CDS
T05736
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03030
DNA replication
ebm03430
Mismatch repair
ebm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG0102_00140 (holB)
03430 Mismatch repair
SG0102_00140 (holB)
03440 Homologous recombination
SG0102_00140 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebm03032
]
SG0102_00140 (holB)
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_00140 (holB)
Enzymes [BR:
ebm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG0102_00140 (holB)
DNA replication proteins [BR:
ebm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SG0102_00140 (holB)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SG0102_00140 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF5392
Motif
Other DBs
NCBI-ProteinID:
BBH25080
UniProt:
A0A3G9J1L7
LinkDB
All DBs
Position
17810..18775
Genome browser
AA seq
321 aa
AA seq
DB search
MKNREILEKTQSVFYRIISRSFAAHKPSHAYLLVGDQTERATLFLAQSMICQQDDLACEE
CEDCRRIADGNFPDLITYDGLEKSIKKEDIEYIQNEFNKSSLEGKGKIYILKNVEKSSDS
AMNSLLKFLEEPLDGVYAILTTKNITKVLPTIQSRCQVIHLLPESKESIRMNLASEGITD
EDARILSQLFGSEKECLANQDSEVYRDVKVYALNFIEDLYTNPSNLLINLEISLMKKYKG
EKETIRMFLNMVVLGLRDLFHVKHSMSITFVNHIDFLKRFQDDPHLLEKIELLLDTIYTI
DTNANLALLLESMVYKLMKGV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagagaaatcttagaaaagacgcagagcgtcttttatcgcattatcagtcgg
tcctttgcggcgcataagccatcgcatgcttatttgttagtgggggatcagacggagcgg
gcaacgctctttttagcccagagtatgatctgccagcaggatgacttagcgtgtgaagaa
tgtgaagactgtcgccgcattgcggatggcaatttccctgatctgattacttatgatggt
ttagagaaatcaattaaaaaagaggatattgaatatatccaaaatgagtttaataaatca
tcgttagaaggtaaggggaagatctacattttaaaaaatgtcgagaagtcatcggactca
gcgatgaacagcttactgaaattcttagaggaaccgcttgatggtgtttatgcaattttg
acaaccaagaacatcactaaagtactgccaacgattcagtcgcgctgtcaggtgattcat
cttttgccggaatcaaaagaaagcattcgcatgaatctggcaagtgaaggaatcacggat
gaggatgcccgcattctctcacagctgtttggctcggaaaaggaatgtcttgctaatcag
gatagtgaagtctatcgtgatgtcaaagtctatgccctgaacttcattgaagacttatat
acgaatccatcaaacctgcttattaatttagaaatctctctgatgaagaaatacaaagga
gagaaggaaacgatcagaatgttcttaaatatggtcgttttgggattaagagacttgttt
cacgtgaaacattcgatgtcgatcacttttgtgaatcatattgattttttgaaacgtttt
caggatgatccccatttattagaaaaaattgagttattattagatacaatttataccatc
gataccaatgccaatctggcattactattggaaagtatggtctataaactgatgaaagga
gtttaa
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