Intestinibaculum porci: SG0102_06280
Help
Entry
SG0102_06280 CDS
T05736
Name
(GenBank) helicase SNF
Organism
ebm
Intestinibaculum porci
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBH25694
UniProt:
A0A3G9JS86
LinkDB
All DBs
Position
655461..658685
Genome browser
AA seq
1074 aa
AA seq
DB search
MLFITDAEFERVISRARNRALARKFYDQGSVLRVHVEETKNGYEIIGQVSVDGTIYTPRI
EVNHNSKIISTECDCIYSDEYTSCAHTGALLLAVQELSPTRFPFDFKADYRQVREKRVKE
QKKREEEAQRQREMRRRNALESASVGLTNAIRDEMVRAFEMTDPTPVKMQVILEIGYRYN
LRFKVGRERFYFIKNIDHFIENINDRSYESYGKSFAWNHHMEDFDEPSQLIYDYLVLASK
QGATDYYYTQQNLINLNGTLWDAFVKLMQQLPEGYSNIRYQTGHERPSIKVEADEYDFIL
KDETHYAFSYGFGKNNIYEIDKEANILYDTVLDQGGVAIKLLEELQQNDGRLYIAHEHMP
DFYQYVIAPIKDYINFHDFDFSAFAKAEDKIVMYGDIDEDEVAYFNILGVYGEEKINLIT
KPETPHSPHVDMIKGFLDSFNPDVDDKYYYFDTNHEETMDFLNKGIPFLASYADIYVSDA
LKKVGTKNKFNVSVGISVQNDLLSIDVDSIDIPKEELAAVLASYKKKKKYHKLKSGEMLY
IESDELGELSEMMDRYHLATKDLKDGHIDMNLNRAFALEQDAEKMSHVTVKRSEAFEDVL
NRLKDYKSHQYPLSAHYQKILRDYQKDGYQWLATMSDLHFGGILADDMGLGKTLQMVTLL
ENTKNNFSIIVTPSSLVLNWLDEFQKFSESISAVAVMGSASERKAIIKNAHHYNSLITSY
DYMRRDVDLYKDYNFDFIILDEAQYIKNQKTKNAISVKKLKGIHRFALTGTPIENSLAEL
WSIFDFLNKDYLFNYTYFKKTYESPIVREHDEKKQAELKNLISPFVLRRTKSQVLKELPE
KVEKTISIEFSSDEHKLYLAHLAAANKQLRSLDGKKDRIQILAMLTKLRQICCEPRMAFD
NVKHISSKMQACLDIIENYKENGKKIIVFSSFKSALELIAQELDASQTKYHMLTGATNKL
KRKEYVDAFQSDDSTVFLISLKAGGTGLNLTAAEGVIHFDPWWNMSAQSQATDRAHRIGQ
KNTVFVYKLIMADSIEEKIQKLQEAKKDLADTFVEGNDGRITSMTTEEIMDLFK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgttatttattacagatgcagaatttgaaagagttatttctcgggcacgcaaccgggcg
ctggctcgtaagttttatgatcaaggctcagtcttaagagtccatgtcgaagagacaaaa
aacggctatgaaatcattggtcaggtcagtgtcgatgggacgatctatacgccaaggatt
gaagtcaaccacaattccaaaattatttccactgagtgtgactgtatttattctgatgaa
tatacctcatgtgcgcatactggcgcgctcttattggcagtccaggaattatcgccaacg
cgttttccttttgattttaaagccgattatcgccaggtcagagaaaagcgcgtgaaagaa
cagaaaaaacgagaagaagaagcgcagagacagcgggagatgcgtcgccgcaatgcttta
gaaagcgcctctgttggtttaaccaatgccattcgtgatgaaatggtcagagcttttgaa
atgactgatcccactcctgtgaaaatgcaggttatcctggaaataggttatcgttataat
ctgcgctttaaagtagggcgtgagcgtttctattttattaaaaatattgatcattttatt
gaaaatatcaatgatcgcagctatgaaagctatggcaaatcctttgcctggaaccatcat
atggaagacttcgatgaaccttcacagctgatttatgattatctggttttagcctctaag
cagggcgcgacggattactattatacccagcagaatctgatcaatttaaatggcacctta
tgggacgcctttgtcaagctcatgcagcagctgccagagggctattccaatattcgttat
cagacgggccatgagcgtccttcgatcaaggtggaagctgatgaatatgacttcatctta
aaagatgagacacattatgcttttagttatggctttggcaagaataatatctatgaaatc
gataaagaagccaatattttatatgatacagttttagatcagggcggtgttgcgattaaa
ctgctcgaagaactccagcagaatgatggccgcttgtatattgcccatgaacatatgccg
gatttctatcagtatgtcattgccccgattaaagactatatcaatttccatgactttgac
ttcagcgcttttgcgaaagctgaagataaaattgtcatgtatggcgatattgatgaagat
gaagtggcttatttcaatatattaggggtctatggtgaggagaaaatcaatctcattacc
aaaccggagacgccgcattctccgcatgtcgatatgattaaaggctttttagattccttt
aatccggatgttgatgacaagtattattactttgatacaaatcatgaagaaacgatggac
ttcctcaataaaggtattcctttcttagcttcttacgctgatatttatgtttctgatgcc
ttaaagaaagtcggtactaaaaataaatttaatgtctcagtcggcatcagtgtacaaaat
gatttattatctatcgatgttgattccatcgatattcctaaagaggaattagccgcggtc
ttagcgtcttataagaaaaagaagaaatatcataagttaaaaagcggggaaatgctttat
attgaatctgatgaattaggtgaattatcagagatgatggatcgttatcatttagcgacc
aaagatctcaaagatggtcatattgatatgaacttaaaccgcgcttttgccttagagcag
gatgctgaaaagatgtctcatgtaacggtcaaacgctcggaggcttttgaagacgtctta
aaccgtttaaaagactataaatcccatcagtatcctttatctgcgcattatcagaagatt
ttacgtgattatcagaaagatggctaccagtggttagcgacgatgagcgatctccacttt
ggcggcatcttagccgatgatatggggctcgggaaaactctgcagatggtgactttatta
gagaataccaaaaataatttttctattattgtgaccccatcctctttggttttaaactgg
ttagatgaattccagaagttctcggaatccatttctgctgtcgctgtcatggggagcgct
agtgaacgtaaagccattattaaaaatgcccatcactacaattccctgattacatcttat
gattatatgcgtcgtgatgtggatctttataaagattataacttcgacttcatcatctta
gatgaagcgcagtatattaaaaatcagaagaccaagaatgccatttcggtgaagaaactc
aaagggattcatcgctttgccttaaccggaacgccgattgaaaactctttagcggaatta
tggtcaatctttgatttcttaaacaaagattacttattcaactatacttacttcaaaaag
acgtatgaatcaccaatcgtgcgtgaacatgatgaaaagaaacaggcggaattaaagaat
ctgatttccccatttgtcttacgtcgtaccaagagtcaggtcttaaaagaattaccagaa
aaagtggaaaagacgattagcatcgaatttagcagtgatgaacataaactctatttagcg
catttagccgctgccaataaacagctaaggagcttagatggcaagaaagaccgcattcag
attctcgccatgttaacgaagctgcgccagatttgctgcgaaccaagaatggcttttgat
aatgtgaaacacatctcttcaaagatgcaggcatgtttagatattattgaaaactataaa
gaaaatggcaaaaagattatcgttttctcttctttcaagagtgctttggagctgattgct
caggaattagatgcgagtcaaacgaaatatcacatgttaacgggggcaacgaataaactc
aaacgtaaagagtacgtcgatgccttccagagtgatgattcaacagtcttccttatttcc
ttaaaagccggcggaacaggtctaaacttaaccgctgccgaaggggttattcactttgac
ccatggtggaatatgtccgcgcagtcgcaggcgactgaccgtgcgcatcgtattgggcag
aagaataccgtctttgtctataaactgattatggcggattcaattgaagaaaaaattcag
aaactgcaggaagcgaagaaagatcttgccgatacctttgtggaaggcaatgatggccgc
attaccagcatgacaacagaagaaattatggatttattcaagtaa
DBGET
integrated database retrieval system
