Intestinibaculum porci: SG0102_09210
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Entry
SG0102_09210 CDS
T05736
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SG0102_09210 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_09210 (recD2)
Enzymes [BR:
ebm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SG0102_09210 (recD2)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG0102_09210 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
UvrD_C
AAA_12
AAA_22
AAA_16
UvrD-helicase
PIF1
SLFN-g3_helicase
AAA
nSTAND3
AAA_14
AAA_28
DUF4537
AAA_24
NTPase_1
AAA_29
AAA_5
DEAD
ABC_tran
Helicase_RecD
T2SSE
AAA_18
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BBH25987
UniProt:
A0A3G9J4A0
LinkDB
All DBs
Position
982835..985048
Genome browser
AA seq
737 aa
AA seq
DB search
MIEYTGTISYVRYYSEETKFIVAIFDCDQEGVKINITGNMSYVNKDERYRITGDYVTHPR
YGKQFQIQSYEVILADDHDQVIRYLSSPLFKGIGTKQAQAIVDTLGDDALTQIKDNPHCL
LRVRGMSEKKMKVITDVLNDQALDHEILNFFMGHGISTRYLTAIQGCYGDETVKVIENNP
YQLIEDIEGIGFKTADDIAMKLNFDPQSEYRILAAIEDALMSQCFKSGATYQRYSDIYYT
FSRFLPDVPSEVFEQALKSLLDKKHIVLEEDRYYPVTLYDSEVTIASLFKKFKRLPKSHY
DQEELEDKLSEIEEMLGIHYDETQKEAIFTFMREPAMILTGGPGTGKTTIVLAILKLYRS
LHPDDHIDLAAPTGRAAKRLAELTNLEASTIHRLLKWDMHKNVFAMDENNPLSTQLLVID
EFSMVDSLLFSKLLKAGKHVTKILMIGDDQQLPSVSCGNVLKDMMTSGIVPVVALNTIYR
QSEGSGIVELAHAIRNNQYHPDLLQAQDVHFMPAANYEVPGKILEIIQEAIDDGFEMDEI
QVLAPMYRGVAGIDALNEAIQNLVNPADPFKEEYKAGRRTFRVGDKILQLKNRVEDEVFN
GDIGILTEIIPKNPQEGTSEILVVTYDDKEIEYSTQDLFQITHAYCMSVHKSQGNEFPIV
IMSVLRDYTIMNRKNLLYTGLTRAKHELFLIGEQNAFTQGLTRDSDAVRNTTLSQRLRGE
KVPALQIDDFSFGDLSF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatatacgggtacgatcagttatgtccgctactacagtgaagaaacgaagttc
attgtggcgatctttgactgtgatcaggaaggcgttaaaatcaatattaccggcaatatg
tcttatgtgaataaagatgaacgctatcgtattacgggtgattatgtcacccatccccgc
tatggcaaacagtttcaaattcagtcttatgaagtgattctggcggatgaccatgatcag
gtcatccgctatttatcatcaccgttatttaaaggcattggcacaaaacaggcgcaagcc
attgtcgataccttaggggatgatgcgttaacacagatcaaagacaatccgcattgttta
ttgcgtgtccgcgggatgagtgaaaagaagatgaaggttattactgatgtcctcaatgat
caggcccttgatcatgaaattctcaatttctttatgggccatggcatttcaacgcgttat
ctgacagcgattcaaggctgttatggtgatgaaaccgtaaaagttattgaaaacaatcct
tatcagctgattgaagatattgaaggaatcggttttaaaacggctgacgatattgccatg
aaactgaactttgatccgcagtctgaataccgcattctcgcggcgattgaagatgcgttg
atgagtcagtgttttaaaagtggggcaacttatcaaagatatagtgatatttattatacc
ttctcacgttttttgccagatgttccctctgaagtgtttgaacaggcattaaagagtttg
cttgataagaagcacatcgttttagaagaagaccgttattatccagttactctttatgat
tccgaagtcacaattgcctcattatttaagaaattcaaacgtttaccaaagtcgcattat
gatcaggaagaactcgaagacaaattatctgagatcgaagagatgttaggaattcattat
gatgaaacccaaaaagaagcgatcttcacctttatgcgcgaaccagcgatgattctcact
ggtggcccgggaacggggaaaacaacgattgttttagcaattttaaagctttatcggtcg
ctgcatcctgatgatcatatcgatttagccgcgcctactggtcgcgccgcgaaacgttta
gccgaattaacaaacttagaagcttctaccattcatcgtttattaaaatgggatatgcat
aagaacgtctttgcgatggatgaaaacaatcccttatcaacgcagttattagtcattgat
gagttctcaatggtggatagtttattattttctaagcttttaaaagcggggaaacatgtc
accaaaatcttaatgattggtgatgatcagcagctgccaagtgttagctgcgggaatgtc
ctcaaagacatgatgacctctgggatcgtgccggtggtcgcactcaataccatttatcgt
cagtcggaaggttccgggattgtcgaattagcccatgcgattcgtaataaccagtatcat
cctgatttattacaagcacaggatgtgcattttatgcctgcggcgaattatgaagtgcca
gggaaaatcttagagatcattcaggaagcgattgatgatggctttgaaatggatgaaatc
caagtcttagcaccgatgtatcgcggtgtcgccggtattgatgcgcttaatgaagccatt
cagaatctcgtgaatcctgccgatccttttaaagaggaatacaaggcgggacgaaggact
tttagagtaggagataaaattctgcagctaaaaaatcgcgtagaggatgaagtctttaat
ggagatattgggatcctcacagagattattcctaaaaatcctcaagaagggacttctgaa
atcttagttgtgacctatgatgacaaagagattgaatatagcacgcaggatctttttcaa
atcacgcatgcttactgtatgtcggttcataaatctcagggcaatgaattccctattgtc
attatgagtgttttacgtgattatacgattatgaatcgtaagaacctgctttatactggg
ttaacccgagcaaagcatgaattattcctcatcggtgagcaaaatgcctttacccaaggc
ttaacgcgagacagcgatgcggtgcgcaacaccactttatcacagcgtttacgcggtgaa
aaagtgcctgctctacaaattgatgatttctcttttggagacctctctttctaa
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