Intestinibaculum porci: SG0102_11940
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Entry
SG0102_11940 CDS
T05736
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03030
DNA replication
ebm03430
Mismatch repair
ebm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG0102_11940 (dnaE)
03430 Mismatch repair
SG0102_11940 (dnaE)
03440 Homologous recombination
SG0102_11940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebm03032
]
SG0102_11940 (dnaE)
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_11940 (dnaE)
Enzymes [BR:
ebm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG0102_11940 (dnaE)
DNA replication proteins [BR:
ebm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SG0102_11940 (dnaE)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SG0102_11940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBH26260
UniProt:
A0A3G9J589
LinkDB
All DBs
Position
1272329..1275391
Genome browser
AA seq
1020 aa
AA seq
DB search
MFGHLVVKSAYSFQNSTILIPDLVKAAKARHLDVLALTDENNMYGTFEFYEACKKAGIKP
IFGVEASININHEIYPFTLLAKDDHGYFDLVRIVSDINLSKSRSLPIRDLARYNEHLIIM
IASDEGIVQRLILKEMEKEAEKYLRFFKDIFKNFYVCLCDHELALGDMMNKRLETLANLV
HIPIVCANDVSYLNPQDALALDLLRASAKGETLSPNHQPKTTACYLKSEEEMMRSFSPEI
IENTKELLNLCKASIPENNKNLPNYPVAEHVQKDLYLRKLCQVGLSKRFLHKQVPQKYID
RLNYELQIIHMMGFDDYFLIVWDYVRYAKVHGILVGPGRGSAAGSLVAYVLGITNIDPLK
YDLLFERFLNPERVSMPDIDIDFEDDRRDEVVNYVIEKYGQDHVCQIVTFNTYGPRVALK
DMGKVMDLPLPRLEMIAKMIPTGPKNKKTITEMYNTSASFQKAINENQTLRKIIGAISII
EHLPRNISMHAAGVVLSTRPLRESVPLVIGPSSMIMSQYSKDYIEKAGLLKMDFLGLRNL
TMMAYIKKDIETHQHRTIDLNHLPLDDVKTYQMLSRADTFGVFQLESAGMRHLLRRMKPH
AFNDIVDAIALYRPGPMENIPLYLERRQSHHVTYLVPALEPILSSTYGIIIYQEQIMQIA
QVIAGFSLGKADVLRKAVSKKNAKTMAEMKEAFIQGSLKQGYSLKIATQIYDLIEKFANY
GFNKSHSVAYAFVAYQLAYLKVHAPLYFFASILSNEGASANTKIHCIEEAKRYHVKILPP
SINRSLNRFTVEEGGIRFALTSIKNVGYSGYKDIAKEREEHGPFNDFVDFLGRMSGRLNS
KMIDSLISAGAFDDFGMSRAMLKGNLATLVEFSRLKMALVEVETPVLKDYEENRYQRLEE
EKDVLGIYLSTHPMAYKKQKIAIPLTNLSDLEEHVNEVVDVMMMIDHVRVIVDKRAREMA
FVEGSDDTSSQDFVIFASQYSTYKNSLERGKVIVANVRISMRDRLSLIINKVKEINEWKN
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacatttagttgtcaaaagtgcctattcttttcaaaatagtactattctcatt
ccagatctcgttaaagcggcgaaagcgcgtcatcttgatgtcttagccttaacggatgag
aataatatgtatggcacttttgagttttatgaagcctgcaagaaagctggcattaagccg
atctttggcgtcgaagcctcgattaatatcaatcatgagatctatccttttaccttactt
gcgaaggatgatcatggctactttgatttagtaaggattgtctcagatattaacttatca
aaaagtcgtagcttgccaattcgtgatttagcccgttataatgagcatcttattattatg
attgccagtgatgaagggattgtgcaacgcttaattctaaaggagatggaaaaggaagcg
gaaaagtatttacgcttctttaaagatatctttaaaaacttctatgtctgtttatgcgat
catgaattagccttaggcgatatgatgaacaaacgtctagaaacgttagccaatttagtc
catattccgattgtctgcgccaatgatgtctcttatctcaatcctcaggatgcgctcgcc
ttagatttattaagggcttcggctaaaggggaaacgctcagtcctaaccatcagccgaaa
acaacggcctgttacttaaaaagtgaagaagagatgatgcgcagcttttctcctgagatt
attgaaaataccaaagaattgctcaatctctgcaaagcgtcgattccggaaaataataag
aatttaccaaactatcccgtcgcagagcatgttcaaaaagatctttacttacgaaagctc
tgccaagttggcttatcgaaacgtttcctgcataaacaggtgcctcagaaatatatcgat
cgtctgaactatgaattacaaattattcatatgatgggtttcgatgattattttctgatc
gtctgggattatgtccgctatgcgaaagtgcatggcatcttagtcgggccgggacgaggc
agtgctgctggatcattagtggcgtatgttttgggcattaccaatatcgatccattaaag
tatgatctgctttttgaacgattcctcaatccggaacgtgtttcgatgcctgatattgat
atcgactttgaagatgatcgccgtgatgaagtggttaattatgtgattgaaaaatatggt
caggatcatgtctgccagattgtcaccttcaatacctatgggcctcgtgtcgctttaaag
gatatgggaaaggtcatggatctgcccttaccgcgcttagagatgattgcgaagatgatt
cctactggtccgaaaaacaaaaagaccattaccgagatgtataataccagtgcttctttc
caaaaggcgatcaatgaaaatcagaccttacggaagatcatcggcgcgatttcgattatt
gaacacttaccgcgtaatatttcgatgcatgcggcaggggttgtcttatcaacaaggccg
ctaagagaatcagtgcctttagtcattggtccctcttcgatgattatgtcccagtactct
aaggactacattgaaaaagccggcttactgaaaatggactttttgggacttcgtaactta
acgatgatggcttatatcaagaaagatattgaaacccatcagcatcgcaccatcgatttg
aatcatcttcctttagatgatgtcaaaacctatcagatgttatcaagggcagataccttt
ggggtattccagttagaatcggccgggatgcgtcatttattaagaaggatgaagccgcat
gcttttaatgatattgtcgatgccattgccctttatcgaccagggccaatggaaaatatc
ccattatatttagaaagacggcaaagtcatcatgtcacgtatttagtgcctgctttagag
ccgattctctcttctacctatgggattattatttatcaggaacagattatgcagatcgcg
caggtgattgccggctttagcttaggcaaagccgatgtcttacgaaaagctgtgtcgaaa
aagaatgcgaaaacgatggctgaaatgaaggaagccttcattcaaggctcgttaaagcaa
gggtattctttaaagattgctacgcaaatctatgatttgattgagaagtttgccaattat
ggttttaacaagtcacactccgttgcttacgcctttgtggcgtatcagttagcgtattta
aaagtccatgcaccgctttatttcttcgcttcgattctctcgaacgaaggcgcttctgcc
aatacgaagattcactgtattgaagaagccaagcgttatcatgtcaagatcttaccgcca
tcgatcaatcgctcgcttaaccgttttaccgttgaagaaggcggcattcgcttcgctctc
acaagcattaaaaatgttggctatagcggctataaagatatcgccaaagagcgtgaagaa
catggtccatttaacgattttgtggactttttaggacggatgagcggtcgtcttaatagc
aagatgattgattccctgatttcggccggggcttttgatgactttggcatgagtcgggcg
atgctgaaggggaacttagcgacgttagtggaattctcccgtttaaagatggcattagtg
gaagtggagacaccggttttaaaggattatgaagaaaaccgctatcagcgtttagaagaa
gaaaaagatgttttaggcatttatttatccacccatccgatggcttataaaaagcagaag
atcgcgattcctttgacgaatttaagtgatttggaagagcatgtcaatgaagtggtggat
gttatgatgatgatcgatcacgtccgtgtgattgtcgataaaagagcgcgtgagatggcc
tttgtggaaggcagtgatgatacttcatcacaggattttgtcatctttgcgtcgcaatat
agtacatataaaaacagtttagaaagaggaaaggtgatcgttgccaatgtccgcattagc
atgcgtgatcgtctttcgctgattattaataaagtaaaggaaataaatgaatggaagaat
taa
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