Intestinibaculum porci: SG0102_11950
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Entry
SG0102_11950 CDS
T05736
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03030
DNA replication
ebm03410
Base excision repair
ebm03420
Nucleotide excision repair
ebm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG0102_11950 (polA)
03410 Base excision repair
SG0102_11950 (polA)
03420 Nucleotide excision repair
SG0102_11950 (polA)
03440 Homologous recombination
SG0102_11950 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebm03032
]
SG0102_11950 (polA)
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_11950 (polA)
Enzymes [BR:
ebm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG0102_11950 (polA)
DNA replication proteins [BR:
ebm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SG0102_11950 (polA)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SG0102_11950 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG0102_11950 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBH26261
UniProt:
A0A3G9JJU9
LinkDB
All DBs
Position
1275379..1277985
Genome browser
AA seq
868 aa
AA seq
DB search
MEELILIDGNSLLFKAFYATSYNGNFMENKDGIPTNAVFGFARMMKKILERNAKYVLVAF
DAGKHTFRNDMLESYKATRKETPAELVPQFAMVREYLTAHNIAYFEKEGYEGDDIIGTLV
KFGESHNLTVSVFTGDKDAFQLCSDHTTIYRTVKGVSELDIYNPATLKEKWDLAPDQIRD
MLGLMGDTADNIPGIKGVGEKTALKLLHQYGTIEGIDEHKEEIKGKLGEKVRAGIEDAKM
SKEVATILTDIPLDVDLETAHYDGYDFDTLKDFFKKYDMNSLIRDISKEAITPRRALTFD
LVNRAPENLGDSALYTAIYDENYHKSIILGFGVYNDTHAFFISFEDALKDQNFLNYLKDA
SIKKYGFAIKSMINGLRWNGIEVNGLSFDLSLATYVLSPSIKEVMKNVADFYGYDDVRYE
EEVYGKGAKKHIPETEILARDCVEKARCIYELMPQAIGKLKEAEQYELYENLELPVTYIL
ADMEFAGAKVDENILKSMDQAFDQEIGEIESQIYDLAGENFNISSPKQLGTILFEKLGLK
NGKKTKTGYSTSQDILEKNIEAHPIVPLVLRYRMLTKLSSTYLKGLQDQIFPDGKIHTIY
KQTLTQTGRLSSVDPNLQNIPVRTHEGKMIRKAFVSDHGYLLSFDYSQIELRILAHLAHV
PKLIEAFKADKDIHAHTAALVFGVNDEDVTPEMRRQAKAVNFGIIYGMTEFRLAKDIGMS
LDEARDFIARYYATYPEIRTYMEGIVKECEAQGYVSTVLNRKRFIPTIHDKNRMVREQAK
RFAMNAPIQGSGADIMKLAMIKVQEAINAHHFKSEIILQVHDELIFDVYKDEIDTFMPVV
KEAMETCFALDVPLKVEGNYADNWCDLK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattaatattaattgatgggaattccctcttattcaaagctttttatgccacg
agttataatgggaatttcatggagaataaagatggtattccaaccaatgccgtcttcggc
tttgcccggatgatgaaaaagatcttagagcgcaatgccaaatatgtgttagttgctttt
gatgccggcaaacatacattccgtaatgatatgttagagagttataaagccacgcgtaaa
gaaacaccagcggaattagtgccgcagtttgcgatggtgagagaatacttaacggcgcat
aatattgcatacttcgaaaaggaaggctacgaaggtgatgatattattgggactttagtt
aagtttggggaatcccataacttaaccgtttctgtctttactggtgataaagatgctttc
cagttatgttccgatcacacaaccatttatcgtacggtgaaaggggtcagtgaattagat
atttataatcctgccactttaaaagaaaagtgggatttagcgcctgatcagatccgtgat
atgttagggctgatgggggacactgctgataatattccaggaattaaaggggttggcgaa
aagaccgctttaaaactgttacatcagtatggcaccattgaaggcattgatgaacataaa
gaagaaatcaaaggcaagttaggggaaaaggtcagagccggcattgaagatgcgaaaatg
agtaaagaagtagccacgatcttaacggatattcctttagatgtggacttagaaaccgct
cattatgatggttatgactttgacaccctcaaagatttctttaaaaagtatgatatgaat
tcactcattcgtgatatttcgaaagaagccatcacgcccagacgcgccttaacttttgac
ttagtgaatcgtgctcctgagaatcttggggatagtgctctttacacagcgatctatgat
gaaaattatcataaatccattatcttaggctttggggtttataatgatacccacgccttc
tttatctcttttgaagatgctcttaaagatcaaaacttcttaaattatttaaaagatgca
tcgattaagaaatatggctttgcgattaaaagtatgattaacggcttacgctggaatggt
attgaagtcaatggcttatcttttgacttatccttagcgacatatgtcttgtcgccatcc
attaaagaagtgatgaaaaatgtggcggatttctatggctatgatgatgtgcgctatgaa
gaagaggtttatggcaaaggcgcgaaaaaacatattccagaaaccgaaatcttagcccgt
gactgcgtggaaaaagcccgctgcatttatgaattgatgcctcaggcgattggtaagctt
aaagaagcagagcagtatgaattatatgaaaacctcgaattaccagttacttatatctta
gcggatatggaatttgccggtgcgaaagttgatgaaaatattctgaaatcgatggatcag
gcctttgatcaggaaattggtgaaatcgaaagtcagatctatgacttagcaggagaaaac
ttcaatatttcttcgcctaaacagttagggacgattctctttgaaaagttaggtctgaaa
aatggcaagaagaccaaaaccgggtattccacttcccaggatatcttagaaaagaatatt
gaggctcatccgattgtcccattagtattacgttatcgcatgttaacgaagttatcgagc
acctacttaaaaggattacaggatcagatctttccagatggcaagatccataccatttat
aaacagaccttaacccagacgggccgtttatcctcagtggatccaaacttacaaaatatt
cccgtacgcacgcacgaaggaaaaatgattcgtaaggcctttgtctctgatcatggttat
cttttatcgtttgactattcccagattgagctgcgtatcttagcgcatttagcgcatgtc
cctaagcttattgaagcgttcaaagcggataaggatattcatgcccataccgctgcttta
gtctttggcgtcaatgatgaagatgtcacgccagagatgcgtcgtcaggccaaagccgtc
aacttcgggattatttatggcatgacggaattccgtctcgccaaagatattggcatgtct
ttagacgaagcgcgcgactttattgcccgttattatgcgacttatccagaaattcggaca
tatatggagggcattgttaaagaatgtgaagcgcagggctatgtctctaccgtactcaat
cgtaaacgttttattccaaccattcatgataaaaaccgtatggttagagaacaggcgaaa
cgttttgcaatgaatgcaccaatccagggcagcggggctgatattatgaaattagccatg
attaaagtgcaggaagcgatcaatgcccatcacttcaaatcagagattatcttacaggtg
catgatgaattgatctttgatgtttataaagatgaaattgatacctttatgccagttgtc
aaagaagcgatggaaacatgcttcgccttagacgtcccacttaaagtggaaggcaactac
gctgataactggtgtgatctgaagtag
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