Intestinibaculum porci: SG0102_13570
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Entry
SG0102_13570 CDS
T05736
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ebm
Intestinibaculum porci
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebm03019
]
SG0102_13570
Messenger RNA biogenesis [BR:
ebm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SG0102_13570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBH26423
UniProt:
A0A3G9JN45
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All DBs
Position
1478834..1479775
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AA seq
313 aa
AA seq
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MEKIKEMKPDMSVTFEAIISQVSIGKTNGKNKRNYLNLILEDQSGEIDAKWWSPTDHDCQ
VCVQGAVVKGSGDVISYNDSIQMKVAKLEVLEVTDEERMKFLPSAPLDVEVMMKEINDTI
SNMQSKALRDITRSLIHDHRASFMSYPAATRNHHDFINGLLYHTYCMLKIAKGIADVYGN
LNNDLLFAGVILHDLGKVKELSGAITPHYTAEGNLLGHISIGHTMIKEKADQLGYHGEEV
VLLEHLVLAHHGKNEFGSPVLPQVKEAEILYLVDNIDARMAMFDKAYEGLAPGETSKRIF
ALENRTLYRPESQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattaaagaaatgaagcccgatatgagcgtgacatttgaagcgatcatatcg
caggtatcaattggcaagaccaacggtaaaaataaacggaactatcttaatttgatttta
gaagatcagagcggagagatcgatgccaaatggtggagcccgactgatcatgactgtcag
gtctgcgtgcagggagccgttgtcaaaggtagcggggatgtcattagttataatgacagc
attcagatgaaagtagcgaaattagaagtattagaggtgactgacgaagagagaatgaag
tttttgccttccgcaccgcttgatgttgaagtgatgatgaaggaaatcaatgatacgatt
tccaatatgcaaagtaaagccttacgggatattacccggtcactcattcatgatcaccgc
gcctcttttatgagttatcccgcggcgacgcgcaatcatcatgattttatcaatggattg
ctttatcatacgtactgcatgttaaaaattgcgaaggggattgctgatgtctatggcaat
ctcaataatgatttgctttttgcaggtgtgattttacatgacttaggcaaggtaaaagaa
ttatctggggcgattacgccgcattacacggcggaaggcaatctgctgggacatatttca
attggtcatacgatgatcaaagaaaaagcggatcagttaggctatcatggtgaagaggtg
gtcttattagaacatttagtattagcccatcatgggaaaaatgagtttggctcaccggtg
ctgccgcaggtgaaagaagcggaaattttgtacttggtggacaatatcgatgcccgcatg
gcgatgtttgataaggcttatgaaggcttagcgccaggtgaaacgagcaagcgtattttt
gcgttagagaaccggaccttgtaccgtccagaatctcaataa
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