Intestinibaculum porci: SG0102_18300
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Entry
SG0102_18300 CDS
T05736
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03420
Nucleotide excision repair
ebm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG0102_18300 (pcrA)
03430 Mismatch repair
SG0102_18300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_18300 (pcrA)
Enzymes [BR:
ebm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG0102_18300 (pcrA)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG0102_18300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SG0102_18300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
ResIII
GatB_Yqey
MLD
Motif
Other DBs
NCBI-ProteinID:
BBH26896
UniProt:
A0A3G9J8A3
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All DBs
Position
complement(1939286..1941427)
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AA seq
713 aa
AA seq
DB search
MNLKELLNPQQYEAATYLDGHLRIIAGAGSGKTRVVTYRIAYLIENVGIAPRNILAITFT
NKAANEMKERVEHILGEEAYGTTICTIHSLCVRVLRRHASLLGYPHNFIIMDEEDQKSLM
KKLFKNNNVSDKGITIKSMIHYISACKTNLITPEKATNLASLPAEKVKAKIYLEYENYTK
EHAMMDFDDLLLNTLCLFQDHTEVVELWSHRYQYVHVDEFQDVGEIEYRLIKYFGKASIV
CVVGDPDQTIYSFRGSDVNYILNFDQDYENVKTVFLNQNYRSTKTILDVSNNLIRRNKHR
LEKDLFTDHEAGDKVVHYSAVSEAAEAEYIANTIMNLENEDGVNFKDIAILYRANYLSRP
IEQVLIQKGIPYKIFGGLKFFNRKEIKDALSYIRLLVDNDDLAFERIANVPTRGVGAKTL
ENIQACALRHGLNEYEALCFYMDEINLTGKAKKGLKALINSMENARLSDKAPEQIFEDLL
RSVGYIEMLTKDHEESRIDNIMELKNSIATYMQEHPDTANFESYLQDIALYTTQDEETDE
DYVSLMSIHMAKGLEFSYVFVAGLSENIFPSIHAMEDNHESGLEEERRLAYVAFTRAKKR
LYLTDSQGYSYVSQSPKVTSRFVQELGTKLVENAGRPSAFKTDHYVKVHESADEQIGDNK
EENWKVGDLVVHDVFGKGVIVAVKGNYVDVAFSVPHGMKTLMSRHKALKRLHS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaagaattattaaatccgcagcagtatgaagctgccacatatttagatggg
catttacgcatcattgccggagccggcagcggcaagacccgcgtggtcacttatcgtatt
gcttatctgattgaaaatgtcggtattgcgccaagaaatatcttagccattacctttact
aataaagcggctaatgaaatgaaagagcgtgtagaacacattttaggagaagaagcgtat
gggacgactatttgcaccattcactccttatgtgtaagagtcttaagacgtcatgcctcg
ctgcttggctatccccataattttattattatggatgaagaagatcagaagtccctgatg
aaaaagctctttaaaaataataatgtgtctgataaggggattacgatcaaatcgatgatt
cactatatcagtgcctgtaaaacgaatctgattacgcctgaaaaggcaacgaatttggct
tctctgccagctgaaaaggtcaaggccaagatttatttagaatatgagaattacaccaaa
gaacatgcgatgatggactttgatgatttactgcttaatactttatgtttattccaggat
catactgaagtggtcgaattatggagtcatcgttatcagtatgtgcatgttgatgagttc
caggatgttggtgaaattgaataccgcctcattaaatattttgggaaagcatcgattgtc
tgcgtcgttggcgatcctgatcagaccatttattccttccgtggcagtgatgtcaattat
attttgaactttgatcaggattatgaaaacgtcaaaaccgttttcttaaatcagaactat
cgttcaacgaaaacgatcctggatgtctctaataatttaattcgccgcaataaacatcgt
ttagaaaaagatttatttaccgatcatgaagccggtgataaagttgttcattattcagca
gtttccgaagcggcagaagcggagtatattgctaatacgattatgaatttagaaaatgaa
gatggtgtcaattttaaagacattgccattctctaccgtgcgaactatctgtcgcggcca
attgaacaggtgcttattcaaaagggcatcccttataagatttttggcggtttaaagttc
tttaatcgtaaggaaattaaagatgctttaagttatatccgtttattagtagataatgat
gatttggcctttgaacgtattgccaatgtgccaacgcgtggagtaggagcaaaaacctta
gaaaatattcaggcttgcgcgctgcgtcatggcttaaatgaatatgaagcattatgtttc
tacatggatgaaatcaatttaacgggaaaagctaaaaaaggtttaaaagctttaatcaat
agtatggaaaatgctcgcttaagtgataaagcgccagagcagatctttgaagatttatta
cgcagtgttggttatatcgagatgttaacgaaagatcacgaagaaagccgtattgataac
atcatggaattaaagaattctattgcgacgtatatgcaggaacatccggatacggctaac
tttgaaagctaccttcaggatatcgctctctatacgacgcaggatgaagaaactgatgaa
gattatgtctctttaatgagtattcatatggctaaaggcttagagttcagttatgttttt
gtggcaggcttatcagaaaatatcttcccatcgattcatgcgatggaagataatcatgaa
agcggcttggaagaagaacgccgtttagcatacgtcgcctttacgcgcgctaaaaaacgt
ttgtatttaacggattcccagggttattcctatgtctctcagtcaccgaaagtgacctcc
cgtttcgtgcaggaattaggcaccaaactggtggaaaatgcgggtcggccaagcgccttt
aaaacggatcactatgtcaaagtccatgaaagcgccgatgagcagattggtgataacaag
gaagaaaactggaaagtgggagacttagtggtgcatgatgtttttggcaaaggcgtcatt
gtggcggtaaagggcaactatgtcgatgtcgcttttagtgtgcctcatggcatgaagacg
cttatgagtcgacataaagctctcaaacgtcttcatagttaa
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