Intestinibaculum porci: SG0102_19240
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Entry
SG0102_19240 CDS
T05736
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG0102_19240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebm03019
]
SG0102_19240 (pnp)
03016 Transfer RNA biogenesis [BR:
ebm03016
]
SG0102_19240 (pnp)
Enzymes [BR:
ebm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SG0102_19240 (pnp)
Messenger RNA biogenesis [BR:
ebm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SG0102_19240 (pnp)
Transfer RNA biogenesis [BR:
ebm03016
]
Prokaryotic type
tRNA degradation factors
SG0102_19240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
PCB_OB
OB_RRP5_4th
SPATA25
ATP-synt_D
Motif
Other DBs
NCBI-ProteinID:
BBH26990
UniProt:
A0A3G9J7F4
LinkDB
All DBs
Position
complement(2040079..2042226)
Genome browser
AA seq
715 aa
AA seq
DB search
MAKQVFTTEFFGKKLTVEVGELAKQANGAALVRYDDTVVLSTACAGKEPKDVDFFPLTVT
YEEKMYSVGKIPGGFLRREGRPSEHGTLTARMIDRPIRPLFADGFRNEVQVVNTVLSVDQ
NASPEMAAMLGASIALCISDIPFNGPIAGVNVGYIDGEYTINAGPEAMENSEINLEVAGT
KFAINMVEADSKEVSEEEMLEAIMFGHEQIKKLIAFEEEIVTAVGKEKMEIPLFSLDETI
VHDVTEVANDRMKAAISIPGKLERYDAIDALKAEVVASYEEKDYEDFAAHDNTIKQVKMV
LDDLEREEVRRLITEEKIRPDGRKVDEIRPLDAQVDLLPRVHGSALFTRGETQVLSVVTL
GAISDEQKIDGLGNETEKRWMHHYNFPPYSVGEVGRMGAPGRREIGHGYLGERALRQVMP
SVEEFPYTIRAVAEVLESNGSSSQASICASTMALMAAGVPIKAPVAGIAMGLVTKGDNYT
ILTDIQGMEDHLGDMDFKVAGTTKGICALQMDIKIDGITRQILEEALAQAKKARAQIMEV
ITNCIPAPRDHLSPYAPKYATMRIAVEQIKDVIGKGGDTINDIIAKCDNVSIDIDEEGLV
TIYHYNQDAIDRAKKMIEDITRKANVGEIYDGKAVRVENNYAFIELFPGTNGFLHVKDVA
WERTEKVSDVIKVGDIVKVKVTQITDKGVNVSRKALLPRPVKKHHDHKEENKSEA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtatttacaacagaattctttggcaagaaactgactgttgaagtcggt
gagcttgcaaaacaggccaacggcgccgcattagtgcgttatgatgacaccgttgtctta
tcgacagcctgtgcgggaaaggaaccaaaagatgtggacttcttcccattaaccgtaacg
tatgaagaaaaaatgtattccgttgggaaaattccaggcggctttttaagacgtgaaggt
cgtccaagtgaacacggcaccttaacagcgcgtatgattgaccgtccaatccgtccatta
tttgcggatggcttcagaaatgaagtacaggtcgttaacaccgttttatcggttgatcag
aatgcctcaccagaaatggctgcaatgttaggggcaagtattgctttatgtatttcggat
atcccatttaatggtccaattgctggggtcaatgttggctacattgatggtgaatataca
atcaatgccggtccagaagcaatggaaaatagcgaaattaaccttgaagtcgctgggaca
aaattcgcaatcaacatggtggaagctgattctaaagaagtctctgaagaagaaatgctg
gaagcgatcatgttcggtcatgaacagatcaagaaactgattgccttcgaagaagaaatc
gtcacggcagtcggcaaagaaaagatggaaattccactattctcattagatgaaaccatc
gttcacgatgtcactgaagtagcgaatgaccgcatgaaagcagctatttctattcctggc
aaattagaaagatacgatgctattgatgctttaaaggctgaagttgtcgcatcttatgaa
gaaaaagattacgaagactttgctgcgcatgataacactattaaacaggtaaagatggtc
ttagatgacttagaaagagaagaagtgcgtcgtcttattacggaagaaaagatcagacct
gatggtcgtaaagtagatgaaattcgtccgttagatgcccaggttgacttattaccacgc
gtgcatggttccgctttatttacccgcggggaaacgcaggtattatcagtcgtcacttta
ggggcgatctctgatgaacagaagattgatggcttaggcaacgaaaccgaaaaacgctgg
atgcatcattataacttcccaccatattcagttggtgaagtcggccgtatgggggcccca
ggtcgtcgtgaaatcggtcatggctacttaggcgaaagagccttacgtcaggttatgcca
agcgttgaagaattcccatatacgatccgtgcggttgcggaagttttagaatctaatggc
tcttcttcacaggcttcgatctgcgcttctacaatggctttaatggctgcaggtgtgcca
attaaagcgcctgttgccgggatcgctatgggcttagtgactaaaggtgataactatacc
atcttaaccgatatccaggggatggaagaccacttaggtgatatggactttaaagtcgcc
gggacgacaaaagggatctgcgccctgcagatggatattaagatcgatgggattacacgt
cagatcttagaagaagcattagcccaggctaagaaagcgcgtgctcagatcatggaagtt
attactaactgtatccctgcaccacgtgatcatttatcaccatatgcccctaaatatgcg
accatgcgtattgccgtggaacagatcaaagatgttatcggtaaaggcggcgatacaatc
aatgatatcatcgctaagtgtgataatgtatcgatcgatatcgatgaagaaggtttagtg
acaatctatcattacaatcaggatgccatcgatcgtgctaagaagatgatcgaagacatt
acccgtaaagccaatgtcggtgaaatctatgacgggaaagctgtccgcgtagaaaataac
tatgcattcatcgaattattcccagggacaaacggcttcttacatgtcaaagacgtcgct
tgggaacgtactgaaaaagtatctgatgtcatcaaagtgggtgatatcgtgaaagttaaa
gtcacccagattaccgataaaggtgtgaatgtttctcgtaaggcattattaccaagaccc
gttaagaaacatcatgaccataaagaagaaaataagagcgaagcataa
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