Intestinibaculum porci: SG0102_19290
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Entry
SG0102_19290 CDS
T05736
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ebm
Intestinibaculum porci
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebm03016
]
SG0102_19290 (truB)
Enzymes [BR:
ebm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SG0102_19290 (truB)
Transfer RNA biogenesis [BR:
ebm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SG0102_19290 (truB)
Prokaryotic type
SG0102_19290 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BBH26995
UniProt:
A0A3G9JF59
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All DBs
Position
complement(2046040..2046876)
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AA seq
278 aa
AA seq
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MNGLLIINKPKGMTSHDVVNIVRKTLHTKKVGHAGTLDPDATGVLVVCVNKATKALQFLT
AEHKQYIATLSLGKATDTYDASGTVLEEKPFTGYADLEDVLQSFIGESMQKPPMYSAIKI
HGKKLYEYARAGEHIDVPARPIAIQDIQLLKEENNEITFQVDCSKGTYIRSLCVDIAKKL
GYPGYMKDLIRTRSGDFTIDQAITLEDLAAGRYTIMPLEEAFASMDRLILEDESIALNGK
KIHQNIDHQVAVYNQKGQLLAIYGPDGKGQLKSLRGLF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaatggactattaattatcaataaacccaaaggcatgacatcgcatgatgtcgtgaat
atcgttagaaaaaccttacatacgaaaaaagtcggccatgccgggacccttgatcctgat
gcaacgggcgtactagtggtttgcgtcaacaaagcgactaaagcgctgcagtttttaacg
gccgaacataaacagtatattgcgaccttatcacttggcaaggcgacggatacttatgac
gctagcggcacggtgttagaagaaaagccgtttactggctatgccgatttagaggatgtt
ttgcagagtttcattggcgagtcgatgcaaaagccgccaatgtattcagcaattaaaatt
catggcaaaaagctttatgaatacgcgagagcgggtgagcatatcgatgtaccggcaaga
ccgattgcaattcaagatattcagttgttaaaagaagaaaacaatgagattacgtttcag
gtcgattgctcaaaaggtacttatattcgctctttatgcgttgatatcgctaagaagctg
ggttatcccggctatatgaaagatctcatacgtacacgcagcggggactttacgattgat
caggcgatcacgttagaagatttagcggccggacgttatacgatcatgccgttagaagag
gcttttgcatcaatggatcgtcttattttagaagatgaaagcatcgccttgaatggcaag
aaaattcatcagaacattgatcatcaggtggctgtttataatcagaaaggacagctgtta
gcgatttatgggcctgatggcaagggccagttaaaaagcttaagggggctattttaa
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