Intestinibaculum porci: SG0102_23750
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Entry
SG0102_23750 CDS
T05736
Name
(GenBank) hypothetical protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm00550
Peptidoglycan biosynthesis
ebm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SG0102_23750
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ebm01002
]
SG0102_23750
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ebm01011
]
SG0102_23750
Enzymes [BR:
ebm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SG0102_23750
Peptidases and inhibitors [BR:
ebm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SG0102_23750
Peptidoglycan biosynthesis and degradation proteins [BR:
ebm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SG0102_23750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Big_2
DUF7173
Peptidase_S13
HL_N-beta
DYN_lid
Motif
Other DBs
NCBI-ProteinID:
BBH27441
UniProt:
A0A3G9JN58
LinkDB
All DBs
Position
complement(2558315..2559577)
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AA seq
420 aa
AA seq
DB search
MWEGHIFLKIFIIIVLASFLGFGLYYDLPTKVQEYYLNSLNDDQVTMDLDECVQLKLKKK
EDYKVSSDNKKVAKIDQDLKISPVKAGETDVHVKTKRQDMVCHIIVANHYLNAPVIYLEP
HQGYRLKQAGKSMYTSDNGAIEVNNGVVTCTRAANGTITTRTKNKTYTNKIVCRDVMSLM
HSSSVTVYDATSKKFLYTKNSDVKMNPASITKILSVYTYLQKIHNVNAPTTLTAEDITTA
SAGGAVTTKINPSERVTYNDLLHGALLVSGADAIVSLCRTTYGSVGNLAATMNANAAKFG
MTNSHFTNGIGMTDPNHYTTGKDLVKLMSHVLQSKAFKKVFYTKKYKTSNGLHVFRSPSS
SYGKQVLGAKNGLTNAAQECVALEEKVNGHDLYVITMHAATSHERKMDIVTMNQYLSFTL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaggacatatctttttaaagatttttatcattattgtattagcatcattttta
ggctttgggttatattatgatttaccgacgaaggtgcaggaatactatcttaatagctta
aatgatgatcaggtgacaatggatttagatgaatgtgtacagttaaaactgaaaaagaaa
gaggactataaagtctcttcggataataagaaagttgcgaagattgatcaggatttaaag
atttcaccagtgaaagcaggggaaacggatgtccatgtcaaaaccaaacgtcaggatatg
gtctgtcatattattgtcgccaatcattatttaaatgcgccggtgatttatctagagccg
catcagggctatcgtctgaaacaggcaggaaagagtatgtataccagtgataatggggct
atagaagtgaataatggggtcgttacttgtacgagagctgcaaatggaacgatcacgaca
agaacgaaaaataaaacctataccaataagattgtctgccgtgatgtgatgtctttgatg
cattcttcatcggtaacggtttatgatgccacaagtaagaaattcctttatacgaaaaat
agtgatgtcaagatgaatccggcctctattacgaagatcttaagtgtctatacgtatttg
cagaagattcacaatgtcaatgcgccaacaactttaacggctgaagatattaccaccgct
tcagcgggtggcgcagtgacaacgaaaatcaatcctagtgaacgtgtcacttataatgat
ttattgcatggtgctttattggtttcaggagcggatgccattgtgtcattatgtcgtaca
acatatggcagtgtgggtaatttggcggccacgatgaatgcgaatgcagcgaagtttggt
atgaccaatagccatttcactaatggcattgggatgacagatcctaatcactatacaacc
ggaaaagatttagtgaaactgatgagtcatgtattacaaagcaaagcttttaaaaaggtg
ttctatacgaaaaagtataaaacatccaatgggttacatgtctttagatcaccatcctct
tcttatggcaaacaggttttaggcgcgaaaaatggtcttaccaatgcagcgcaagaatgt
gtagctttagaagaaaaggtcaatggtcatgatctgtatgtgattacgatgcatgcagcg
acatctcatgaacgtaaaatggatattgtaacgatgaatcagtatctctcattcactctg
taa
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