Intestinibaculum porci: SG0102_24380
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Entry
SG0102_24380 CDS
T05736
Symbol
himA
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ebm
Intestinibaculum porci
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebm03032
]
SG0102_24380 (himA)
03036 Chromosome and associated proteins [BR:
ebm03036
]
SG0102_24380 (himA)
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_24380 (himA)
DNA replication proteins [BR:
ebm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SG0102_24380 (himA)
Chromosome and associated proteins [BR:
ebm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SG0102_24380 (himA)
DNA repair and recombination proteins [BR:
ebm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SG0102_24380 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HTH_IclR
HU-DNA_bdg
HHH_RecD2
Motif
Other DBs
NCBI-ProteinID:
BBH27504
UniProt:
A0A3G9JXH7
LinkDB
All DBs
Position
complement(2603585..2603860)
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AA seq
91 aa
AA seq
DB search
MKKADLVAQIAEKSGLSKADAERALKGFTEAVVEALQNGDEVPLQGLGKFEVRERAARKG
INPATKEQIDIPASKVPAFKASSSLKALLKK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcagatttagttgcacagattgcagaaaaatcaggtttatcaaaagcagat
gctgaaagagcattaaaaggttttactgaagctgttgtagaagcattacagaacggtgat
gaagtcccactacagggcttaggtaagtttgaagtacgtgaaagagctgcccgtaagggt
attaatcctgcgactaaggaacagatcgatattcctgcttcaaaagttcccgcttttaaa
gcttcttcatcattaaaagcattattaaagaaataa
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